Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00168 ATGTCAAGAGAAAGAGAATTGCAGGAGGTTGATGAGATAAAGAGGGAGGTGGTTGAAGGGTTTTATCCATTAATGGGAAGAAGGCAGATATTGAGTCAAGCTGGGGCGCTGAATACCATAACGCCATGTGCGGCCTGTAAGCTATTAAGAAGAAGGTGCGCTCAAGAATGCCCATTTTCTCCCTATTTCTCTCCGCATGAACCCCACAAGTTTGCTTCGGTCCATAAGGTTTTTGGTGCCAGCAACGTGGCTAAGATGCTCATGGAAGTGCCGGAGAGTCAAAGAGCGGACGCCGCAAACAGCCTGGTGTATGAAGCCAATCTGAGGCTGAGGGATCCAGTGTACGGCTGCATGGGCGCCATTTCTGCTCTCCAACACCAACTTCAAACCTTACAAGCTGACCTCAACGCTATAAGAACTGAGATTTTGAAGTACAAATATAGAGAAGCCATCATCCCTTCTCCTTCCTCCTCTTCCTCTTCCCACATCGCTTTCATTTCCGCTACCGGGCTCGTATCCACCACCGCAACCCCACCTACTGCCCCGCCAACTCCGCCGCCTTCTCAGCCACCTCCGCTCTCTCTTCCCCCGCCTCTTCCTCCCTCCTCCTCCTCCATCTTTTCTCCGCCCATCAGCACCACCACTGCCCCTCAACTAATTAACCCCATCTCAACCCAACATATTCCTTACTTTGGTTAA 699 51.07 MSRERELQEVDEIKREVVEGFYPLMGRRQILSQAGALNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGAISALQHQLQTLQADLNAIRTEILKYKYREAIIPSPSSSSSSHIAFISATGLVSTTATPPTAPPTPPPSQPPPLSLPPPLPPSSSSIFSPPISTTTAPQLINPISTQHIPYFG 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 906004 907429 - Carg02149-RA Car15g00168 162005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00168 232 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Car15g00168 232 MobiDBLite consensus disorder prediction 178 205 - -
Car15g00168 232 Pfam Lateral organ boundaries (LOB) domain 42 138 IPR004883 -
Car15g00168 232 MobiDBLite consensus disorder prediction 174 219 - -
Car15g00168 232 Coils Coil 121 141 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g00107 Car15g00168 CCT
Car04g00107 Car15g00168 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00107 Car-Chr4:584333 Car15g00168 Car-Chr15:906004 6.44E-66 dispersed
Car15g00168 Car-Chr15:906004 Car02g00432 Car-Chr2:3418787 4.94E-46 dispersed
Car15g00168 Car-Chr15:906004 Car04g00127 Car-Chr4:676771 2.51E-46 wgd
Car15g00168 Car-Chr15:906004 Car04g01001 Car-Chr4:5755961 3.63E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4777 PF03195 LOB 2.00E-40 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00168 - - mcha:111006433 249.595