Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00193 ATGGCCATCATGTTGGCCCTGCTTCTTACAACTCTCGCATTTGCAGCGACGTCGTTTTGCATCTTCTCTTTATTATACCACACCCTCTCCTGCTACTGGCTCACTCCCAGGCGCATCATGAGGAAGATGGCTAAGCAAGGCGTGCGTGGCCCCAAGCCCCGCCCTCTCCTCGGAAACATCCTCGACGTCGCCGCCCTCCTCTCCAAGTCCACCTCCTCCGACATGCCCTCCATCTCCCACGACCTCGTCCCCCGCCTCCTCCCCCACTACCTCGCCTGGTCCGCCCAATTCGGTAAGAGATTCATCTTCTGGAACGGAATTGAACCCAGAATGTGTCTCACAGAAACCCATTTGATCAAAGAGCTGTTGTCCAAATACAGCTCTGTCTCCGGCAAGTCCTGGCTCCAACAACAGGGCTCTAAGCACTTCATTGGCCGTGGTCTCTTAATGGCCAACGGCCCCAATTGGTTCCATCAACGCCATATCGTCGCCCCCGCTTTCGTCGGTGACCGCCTCAAGAGTTACGCAGGGTACATGGTAGAGTGTACTAGGGAGATGCTTCAATCATTAGAAAATGAGGTAAAATCGGGGCGATCCGAATTCGAAATCGGCGAGTATATGACCAGACTCACCGCCGATATAATTTCCCGAACCGAGTTTGAAAGCAGCTACGAAAAGGGTAAACAAATCTTCCATTTACTCACCGTTTTACAACATCTCTGTGCTCAGGCCAGCCGCCACCTCTGCCTTCCCGGTAGCCGGTTTTTTCCAAGCAAGTATAACAGAGAGATAAAGGCATTGAAGGGGAAAGTGGAGGGGTTATTAATGGAGATAATACAGAGCAGAAAGGACGGCGTGGAGATTGGGCGAAGCAGTTCATACGGAAACGATTTATTGGGAATGTTACTAAACGAAATGCAGAAGAAAAAAAATGGGAACGGTTTAAGTTTAAATTTACAGATCATAATGGACGAATGCAAGACGTTCTTCTTCGCCGGCCATGAAACCACCGCTCTTCTTCTCACATGGACCATAATGCTATTAGCCACCAACCCATCATGGCAAGACAGGGTTCGAGCCGAGCTCAACGCGGTTTGCAACTCACAGACCCCCTCGCTCCACCATCTCTCCAAGCTTCCTCTGTTGGGTATGGTGATTAATGAGTCGTTAAGGCTGTACCCGCCGGCGAGCATTCTTCCCCGGATGGCGTTTGAGGATATAAAGCTGGGAGATTTGGAGATCCCGAAAGGGCTGTCGGTGTGGATTCCGGTGGTGGCGATTCACCACAGCGAGGAGATTTGGGGTAAGGACGCCAATGAGTTTAACCCGGAGAGATTTGGGAGCTCCAAGGCGTTTACTTGTGGTGGGTTCATCCCGTTCGCTTCTGGGCCTCGTAATTGCGTCGGCCAAGCCTTTGCTCTGATGGAAACGAAGATCATATTGGCTATGCTCATCTCCAAGTTCAGGTTTACGATATCACCAAGCTATCGGCATGCACCAGTTGTCGTCCTCACTGTTAAGCCTAAATATGGTGTCCAAATTTGCTTGACTCCTTTGACTTGA 1563 50.86 MAIMLALLLTTLAFAATSFCIFSLLYHTLSCYWLTPRRIMRKMAKQGVRGPKPRPLLGNILDVAALLSKSTSSDMPSISHDLVPRLLPHYLAWSAQFGKRFIFWNGIEPRMCLTETHLIKELLSKYSSVSGKSWLQQQGSKHFIGRGLLMANGPNWFHQRHIVAPAFVGDRLKSYAGYMVECTREMLQSLENEVKSGRSEFEIGEYMTRLTADIISRTEFESSYEKGKQIFHLLTVLQHLCAQASRHLCLPGSRFFPSKYNREIKALKGKVEGLLMEIIQSRKDGVEIGRSSSYGNDLLGMLLNEMQKKKNGNGLSLNLQIIMDECKTFFFAGHETTALLLTWTIMLLATNPSWQDRVRAELNAVCNSQTPSLHHLSKLPLLGMVINESLRLYPPASILPRMAFEDIKLGDLEIPKGLSVWIPVVAIHHSEEIWGKDANEFNPERFGSSKAFTCGGFIPFASGPRNCVGQAFALMETKIILAMLISKFRFTISPSYRHAPVVVLTVKPKYGVQICLTPLT 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1029088 1031165 - Carg02174-RA Car15g00193 162030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00193 520 Coils Coil 180 200 - -
Car15g00193 520 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 PRINTS E-class P450 group I signature 424 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 515 - -
Car15g00193 520 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 Pfam Cytochrome P450 95 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 515 - -
Car15g00193 520 SUPERFAMILY Cytochrome P450 50 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00193 520 Gene3D Cytochrome P450 32 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00354 Car-Chr1:2004019 Car15g00193 Car-Chr15:1029088 1.79E-08 dispersed
Car02g00812 Car-Chr2:5886435 Car15g00193 Car-Chr15:1029088 5.06E-98 dispersed
Car05g01229 Car-Chr5:11516646 Car15g00193 Car-Chr15:1029088 8.82E-115 dispersed
Car07g00874 Car-Chr7:4693798 Car15g00193 Car-Chr15:1029088 3.97E-32 dispersed
Car10g00532 Car-Chr10:2662511 Car15g00193 Car-Chr15:1029088 1.30E-97 dispersed
Car12g01199 Car-Chr12:11411729 Car15g00193 Car-Chr15:1029088 1.23E-47 dispersed
Car14g00741 Car-Chr14:4160818 Car15g00193 Car-Chr15:1029088 2.37E-29 dispersed
Car15g00193 Car-Chr15:1029088 Car18g01157 Car-Chr18:11372741 2.26E-94 dispersed
Car18g00759 Car-Chr18:8642171 Car15g00193 Car-Chr15:1029088 1.10E-15 dispersed
Car14g00742 Car-Chr14:4162539 Car15g00193 Car-Chr15:1029088 0 transposed
Car15g00193 Car-Chr15:1029088 Car04g02747 Car-Chr4:21198865 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00193 K10717 - csv:101215037 924.85