Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car15g00204 | ATGGCGGTTCCCGCTGTTCAGTTCCCGATTTTCATGGCTGTCAGAGTGCTCGGGATGGTTGTGGCAGCTCTTGTGTTCATTTGGACCTTGCATTTCCGTGGAGGTTTGGCACTTAGCTCAGACAACAAGGATCTCATCTTCAATGTTCATCCTGTTCTTATGGTGATTGGACTTATTCTTCTAAATGGTGAAGCCATGTTAGCATACAAGACAGTTTCAGGAACCAAGAACTTCAGGAAACTAGTTCATCTTGCACTCCAGTTTGTTGCATTGTTTTTAAGCCTGATTGGCATATGGGCTGCCTTGAAGTTCCACAATGACAAGGGAATCGAAAACTTTTACAGTCTACATTCATGGTTGGGCTTAGTTTCTGTCTTTTTGTTTGGCATCCAGTGGGGTGCAGGATTTGTAACCTTTTGGTACCCAGGTGGCTCAAGAAACAGCAGAGCTACTCTGTTGCCATGGCATGTTTTCTTTGGCGTTTACATATATGGCCTCTGCATTGCTACAACTGTTACTGGATTGTTGGAAAAGGCTACCTTTCTTCAAACCAGTAAGGTAATATTACGCTATTCTAATGAGGCTTTGCTGATAAATTCATTGGGTATCGTCGTCGTTGTTTTGGGTGGCCTCGTAGTTCTTGCGGTTATCGCTCGGTCGAACGACAAAGGTGACGTTTACAGAGGGCCAGCAGAGTAG | 699 | 44.64 | MAVPAVQFPIFMAVRVLGMVVAALVFIWTLHFRGGLALSSDNKDLIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNFRKLVHLALQFVALFLSLIGIWAALKFHNDKGIENFYSLHSWLGLVSVFLFGIQWGAGFVTFWYPGGSRNSRATLLPWHVFFGVYIYGLCIATTVTGLLEKATFLQTSKVILRYSNEALLINSLGIVVVVLGGLVVLAVIARSNDKGDVYRGPAE | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 1108665 | 1111286 | - | Carg02185-RA | Car15g00204 | 162041 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car15g00204 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 217 | IPR006593 | - | |
| Car15g00204 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car04g02735 | Car15g00204 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car02g00806 | Car-Chr2:5867166 | Car15g00204 | Car-Chr15:1108665 | 3.27E-52 | dispersed | |
| Car04g00044 | Car-Chr4:239928 | Car15g00204 | Car-Chr15:1108665 | 4.83E-52 | dispersed | |
| Car15g00204 | Car-Chr15:1108665 | Car19g00304 | Car-Chr19:4571821 | 1.56E-42 | dispersed | |
| Car15g00204 | Car-Chr15:1108665 | Car18g00976 | Car-Chr18:10297132 | 1.05E-46 | wgd | |
| Car15g00204 | Car-Chr15:1108665 | Car04g02735 | Car-Chr4:21142225 | 3.36E-140 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car15g00204 | K08360 | - | csv:101212633 | 414.075 |