Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00207 ATGGCTTCACCTTCTCCTTCTCCGGCGGCGGAGTCTGCCATATCTTCCTCGTCTCCTACATCTTCTGAGCCTAATCAGTCTGGTGAACCTCCTTCATCATCTTCTAGTTCTTCAGCTCCGCCTCCTCAGTCACCACCACCAGCAGTTTCTGATGCTCCTCCTCCTTCTCCTCCATTGATAGCATCACCACCTGCACCACCAATATCCCCTCCTTCTCCCCTTGCTGGCTCACCGTCTTCGCCTCCGCAATCTTCGTCCTCACCGCCGCCACCTTCAGCATCAACCTCCCCACCACCACATTCAGCATCCTCCTCTGCACCACCACCTTCAACATCAACCTCTGCACCACCGCCTTCAACATCAACCTCTGCACCTCCGCCTTCAACATCAACCTCTGCACCTCCGCCTTCAACATCAACCTCTCCACCACCGCCTTCAAGATCAACCTCTCCACCACCACGTTCATCAACATCACCACCACCTTCCTCTGCATCACCTCCTCCCCCAAAACAATCCGTTTCCTATCCTCCTCCTCCCGAAGCTTCACCTCCCCCTTCTGATTTATCACCTCCGCCGCCACCAGCCGCAGCAGGTGGTTCTCCCCCTCCTCTATCCAATCCTAGACCTCCACCTTCTACTCGCCCTCCCCCTCCTCCTGATATTGTTTCACCTTCTCCTCCTCCATCAGCTAATGTCCCAACACCACCTTCATCAACAGGAGAATCACCTAAAGTATCTCCTCCATCCCACAAGGCATCTCCTCCTCCTCCTGATCATAGCTCCCCTCCACCAAGATCTACAGTACCATCGCCCCCTCCTTCTTCAGTCCCTTCATCATCTGCTCCTCCTCCAGTTAGTGATCCTGGTTCTCCAACCAATTCATCAGGGGGAAGTCCTGTTACCCCTTCAACTTCTGTTACACCAGAACGGCCAATTCCAATAATCAATGGTACCAGTGTTGCAACAAATACCCCAACCACTGGTAAAAGGGGTTTCAGCACTGGAACATTTGTGGCAGTTGGCAGCGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCAATTTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAAGAATATCCCTTACACCGTGTCTTCTCCTTTTTCCTCCCAAAACTCAGATGCCTTTTTCCTAAGAGCCCATTCTTTAGCTAATGTGGTTGGAAGTCGAACCGATAGCGATTTCAAGTATGCGTCATCAGAAGGAGGTGGAGTAGGTAACTCAAGATCGTTTGCTTATGAAGAGCTACACCAGGCCACAAGTGGGTTTTCATTGAATAGTCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTACAGAGGCACCCTTGCAGATGGACGAGATGTAGCCGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCTGAAGTTGAAATTATTAGCCGAGTACACCATCGACATTTGGTTTCCCTGGTTGGTTACTGTATCTCTGACCATCAAAGATTGCTTGTCTATGACTATGTTCCAAACAATACCCTTCATTATCATCTGCACGGTGAAAACAGGACAGTTTTGGCTTGGGCTTCACGTGTTCGAATTGCTTCTGGTGCAGCCCGTGGAATCGCTTACCTACATGAAGATTGTCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTTGATATCAACTTCGAAGCTCAGGTCGCAGATTTCGGGCTTGCTAAATTGGCGTTGGATTCACTGACTCATGTAACGACTCGTGTTATGGGAACCTTTGGATACATGGCGCCAGAGTACGCAACAAGTGGGAAATTGACTGATAAATCTGATGTTTTCTCTTTTGGGGTTGTACTTTTGGAGTTAATTACTGGTCGCAAGTCTGTAGATTCTTCTCAGCCTTTGGGAGATGAGAGCTTAGTTGAATGGGCTCGACCGCTGCTGGCACAAGCTATTGAGGATGAGAACTTTGAAGAATTGGTGGATCCAAGGCTAGACAACAATTATGTCGACAGAGAAATGTTTCGAATGATCGAAGCAGCCGCTGCCTGCGTTCGTCATTCAGCCGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTTCAAATGGGGTGAAACCTGGACAGAGTGAAGTGTTTGATTCAGCTGAACATTCTGCTCAGATTAGAATGTTTCAGAGAATGGCTTTTGGCAGTCAAGATTACAGTTATGGTTACTCCGATCGAGATCGAGATCGAGATCGGAGTCGAAGTTATAGTCGAAGTCAGAGTAGCTGGAGTAGAGAATCGAGAGATCAAAGTCCATCGGTGCCTAATAATCGATCCCGGCACGTCTGA 2376 48.53 MASPSPSPAAESAISSSSPTSSEPNQSGEPPSSSSSSSAPPPQSPPPAVSDAPPPSPPLIASPPAPPISPPSPLAGSPSSPPQSSSSPPPPSASTSPPPHSASSSAPPPSTSTSAPPPSTSTSAPPPSTSTSAPPPSTSTSPPPPSRSTSPPPRSSTSPPPSSASPPPPKQSVSYPPPPEASPPPSDLSPPPPPAAAGGSPPPLSNPRPPPSTRPPPPPDIVSPSPPPSANVPTPPSSTGESPKVSPPSHKASPPPPDHSSPPPRSTVPSPPPSSVPSSSAPPPVSDPGSPTNSSGGSPVTPSTSVTPERPIPIINGTSVATNTPTTGKRGFSTGTFVAVGSVVGVLVLSLVIMAIWFVQKRKRRKKNIPYTVSSPFSSQNSDAFFLRAHSLANVVGSRTDSDFKYASSEGGGVGNSRSFAYEELHQATSGFSLNSLLGEGGFGCVYRGTLADGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDHQRLLVYDYVPNNTLHYHLHGENRTVLAWASRVRIASGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSLTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKSVDSSQPLGDESLVEWARPLLAQAIEDENFEELVDPRLDNNYVDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLSNGVKPGQSEVFDSAEHSAQIRMFQRMAFGSQDYSYGYSDRDRDRDRSRSYSRSQSSWSRESRDQSPSVPNNRSRHV 791
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1142382 1147109 - Carg02188-RA Car15g00207 162044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00207 791 ProSitePatterns Protein kinases ATP-binding region signature. 438 460 IPR017441 GO:0005524
Car15g00207 791 MobiDBLite consensus disorder prediction 749 791 - -
Car15g00207 791 ProSiteProfiles Protein kinase domain profile. 432 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00207 791 MobiDBLite consensus disorder prediction 248 289 - -
Car15g00207 791 MobiDBLite consensus disorder prediction 766 791 - -
Car15g00207 791 MobiDBLite consensus disorder prediction 35 234 - -
Car15g00207 791 Pfam Protein tyrosine and serine/threonine kinase 434 705 IPR001245 GO:0004672|GO:0006468
Car15g00207 791 ProSitePatterns Serine/Threonine protein kinases active-site signature. 552 564 IPR008271 GO:0004672|GO:0006468
Car15g00207 791 MobiDBLite consensus disorder prediction 1 327 - -
Car15g00207 791 MobiDBLite consensus disorder prediction 751 765 - -
Car15g00207 791 MobiDBLite consensus disorder prediction 290 327 - -
Car15g00207 791 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00056 Car-Chr1:304231 Car15g00207 Car-Chr15:1142382 6.32E-98 dispersed
Car04g01604 Car-Chr4:9273625 Car15g00207 Car-Chr15:1142382 8.46E-125 dispersed
Car04g01766 Car-Chr4:10109406 Car15g00207 Car-Chr15:1142382 2.73E-91 dispersed
Car10g00392 Car-Chr10:1946187 Car15g00207 Car-Chr15:1142382 7.59E-87 dispersed
Car11g00565 Car-Chr11:3033635 Car15g00207 Car-Chr15:1142382 7.12E-91 dispersed
Car11g01498 Car-Chr11:12075173 Car15g00207 Car-Chr15:1142382 1.85E-74 dispersed
Car12g01220 Car-Chr12:11628396 Car15g00207 Car-Chr15:1142382 1.16E-128 dispersed
Car14g01122 Car-Chr14:9909983 Car15g00207 Car-Chr15:1142382 1.47E-90 dispersed
Car15g00207 Car-Chr15:1142382 Car18g00729 Car-Chr18:8428061 7.97E-173 dispersed
Car15g00207 Car-Chr15:1142382 Car18g00985 Car-Chr18:10354626 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89373 PF07714 PK_Tyr_Ser-Thr 7.10E-45 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00207 - - csv:101211665 805.823