Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00214 ATGAAGAGAACTGAGGCTACTGCTTCTTGTCTTGTGGCTTCTTTATTGTTTTGGGCTTCTGCAATAAATGGCTTGCTATCTCCCAAAGGTGTTAACTATGAAGTTCAAGCTCTGATGGGTATAAAAGCTTCACTTCAAGATCCCCATGGCGTGCTTGAGAATTGGGATGGAGACTCTGTTGACCCATGTAGTTGGACTATGGTTACTTGCTCCCCTGACAGCCTTGTCATTGGCCTGTTAATCCTCTTCTCCACCTTCTTCTTTAAGAATTTGAACTCAAAATTTGTAGATGAAGAGTTGGGAAAATGGAGGCAATCCACCATTGAAGTTCTGATTCATTTTTCTTTCTTTTGGTGGGTTTTGTACGTAATGCAGAGGGACTCCAAGTCAGAACCTGTCTGGGACTCTTTCTTCAAGCATTGGGAATTTGACAAACCTTCAAATTGTAACAACAATATTACGGGCCCAATCCCCCCAGAGCTTGAGAGGCTCTCAAAGCTCCAAACACTTGATCTATCAAGCAATTTCTTCACCGGGAAAATTCCTTCTTCTTTAGGCCATTTGAGAAGCCTACAGTACTTGAGGCTTAACAACAACAGTCTTTCTGGGGTAATTCCAATGTCTGTAGCTAACATGACACAGCTTGTGTTTCTCGATGTGTCTTATAATAATATCAGTGGCCCTCTCCCCAGATTGCCCAGCAAAACTTTCAACATTGTTGGAAACCCTCTGATCTGTGCAACTGGGTCCGAGGTCGGTTGCCACGGTTCAACTCTAATGCCCATGTCCATGAACTTGAACAGTACACAAACTGGTTTACCTGCTGTGAGATTGAAAAGTCATAAAATGGCCCTTACATTTGGCTTGAGCCTAGCTTGCCTAAGTCTGATTGTTCTTGTATTTGGACTGTTCATATGGTGGCGAAGACGAAGCAATCGCCCGACGTTTTTCGATGTAAAAGACGGACAACATGAGGAAATTTCGCTTGGAAATCTGAGAAGGTTCCAATTTAGACAACTTCAGATAGCAACAAACAACTTCAGCAGCAAGAACATACTAGGAAAGGGAGGTTTTGGAAATGTTTACAAAGGAATTCTTTCAGATGGAACGGTTGTAGCTGTTAAAAGGCTCAAGGATGGCAATGCAAGTAGAGGTGATATCCAGTTTCAGACTGAAGTCGAGATGATCAGCCTAGCCGTGCACCGTCATCTCCTCCGACTGTACGGGTTTTGCAACACACCAACCGAAAGGATTCTTGTTTACCCGTATATGTCTAATGGAAGCGTTGCATCACGTCTCAAAGGAAAACCGGTATTAGACTGGGGAACAAGGAAGAGAATTGCTATAGGAGCTTCAAGGGGATTGTTATACCTCCATGAACAATGTGACCCAAAGATCATACATAGAGACGTTAAGGCTGCAAACATATTGCTCGACGACTACTGTGAGGCTGTCGTTGGAGATTTCGGGTTGGCAAAGCTTCTCGACCACCAAGATTCACATGTCACAACTGCTGTGAGAGGCACCGTGGGTCATATAGCTCCTGAGTATCTCTCGACTGGGCAGTCATCCGAGAAAACAGACGTTTTTGGATTCGGAATTCTACTCCTTGAACTGATCACAGGGCAGAAAGCCCTTGAGTTTGGCAAAACAGCTAATCAGAAAGGAGGCATTCTTGAATGGGTGAAGAAGATTCACCAGGAGAAGAAGCTGGAAGTGCTAGTGGACAAGGATCTGAAAGCCAACTATGACAGAGTTGAGCTAGAGGAGATGGTTCAAGTGGCTCTGTTGTGTACACAATACCAACCAGGACACAGACCGAAGATGTCAGAAGTTGTCAGAATGCTTGAAGGAGAAGGTCTTGCTGTCAGATGGGAAGCTTCTCAGAGAGTTGACTCAACAAAGTGCAAACCTCATGATTTCTCTTCATCTGACAGATACTCTGATCTCACAGATGACTCATCCTTGTTGGTCCAAGCCATGGAGCTCTCTGGTCCAAGGTGA 2004 44.36 MKRTEATASCLVASLLFWASAINGLLSPKGVNYEVQALMGIKASLQDPHGVLENWDGDSVDPCSWTMVTCSPDSLVIGLLILFSTFFFKNLNSKFVDEELGKWRQSTIEVLIHFSFFWWVLYVMQRDSKSEPVWDSFFKHWEFDKPSNCNNNITGPIPPELERLSKLQTLDLSSNFFTGKIPSSLGHLRSLQYLRLNNNSLSGVIPMSVANMTQLVFLDVSYNNISGPLPRLPSKTFNIVGNPLICATGSEVGCHGSTLMPMSMNLNSTQTGLPAVRLKSHKMALTFGLSLACLSLIVLVFGLFIWWRRRSNRPTFFDVKDGQHEEISLGNLRRFQFRQLQIATNNFSSKNILGKGGFGNVYKGILSDGTVVAVKRLKDGNASRGDIQFQTEVEMISLAVHRHLLRLYGFCNTPTERILVYPYMSNGSVASRLKGKPVLDWGTRKRIAIGASRGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALEFGKTANQKGGILEWVKKIHQEKKLEVLVDKDLKANYDRVELEEMVQVALLCTQYQPGHRPKMSEVVRMLEGEGLAVRWEASQRVDSTKCKPHDFSSSDRYSDLTDDSSLLVQAMELSGPR 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1181391 1184941 + Carg02195-RA Car15g00214 162051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00214 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Car15g00214 667 ProSiteProfiles Protein kinase domain profile. 347 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00214 667 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Car15g00214 667 Pfam Leucine rich repeat 166 225 IPR001611 GO:0005515
Car15g00214 667 Pfam Protein kinase domain 348 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00214 667 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02119 Car15g00214 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02119 Car-Chr4:17248356 Car15g00214 Car-Chr15:1181391 1.87E-177 dispersed
Car05g00023 Car-Chr5:126905 Car15g00214 Car-Chr15:1181391 0 dispersed
Car07g00150 Car-Chr7:889423 Car15g00214 Car-Chr15:1181391 0 dispersed
Car10g00409 Car-Chr10:2041851 Car15g00214 Car-Chr15:1181391 0 dispersed
Car15g00214 Car-Chr15:1181391 Car18g00991 Car-Chr18:10395919 0 wgd
Car15g00214 Car-Chr15:1181391 Car04g02726 Car-Chr4:21075052 7.36E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89374 PF00069 Pkinase 1.20E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00214 - - cpep:111808464 1150.96