Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00229 ATGGCGTTGGCCATGGTCATTCTTGCTCTGTTCTTGCTCCTCTGTTTTTGTGCTGCTTTGCTGCGATGGAATGAAGTTCGATACAGCAAAAAAGGGTTGCCTCCTGGTACAATGGGCTGGCCTATTTTTGGGGAAACCACTGAGTTTCTCAAGCAAGGACCAAACTTTATGAAATCCCAAAGAGCTAGGTATGGGAGCATTTTCAAGTCCCATATTTTGGGGTGTCCTACGATTGTTTGTATGGATCCAGAGGTTAATAGATATGTTTTAATGAATGAATCAAAAGGGCTTGTCCCTGGTTACCCTCAGTCCATGCTTGACATCCTTGGCAAATGCAATATCGCCGCCGTCCATGGCAGCGCCCACAAGCTCATGAGAGCTGCTCTGCTCTCCGTCGTGAGCCCCACCATGATTAAAGACCGACTTCTTCCTAAAGTTGATGAGTTTATGCGATCCCATTTGAGGAATTGGGATCGCCAAATCATTGACATCCAAGACAAGACTAAAGAGATGGCGCTCTGCTCATCTTTGAAGCAGATTGCTGGAATCGAGTCCGGTCCGCTATCAGAATCTTTCATCCCGGAGTTCTTCAAGCTCGTTCTCGGCACCCTCTCGCTCCCCATCGATTTTCCTGGCACAAACTACCGCCAAGGAATTCAGGCGAGGAAGAGCATAATAAAGCTATTGCAGAAGCTGATAGACGAGAGAAGAGCCTCAAAGACAGAAAAAGATGACATGCTTGGGTTTTTTATGAGCGAGGAGAACAAATATAAGCTGAAGGATGAAGAGATCATTGATCAGATCATCACAGTTTTGTACTCTGGCTATGAAACTGTTTCGACAACTTCAATGATGGCTGTCAAGTTTCTCCATGATCATCCCAAAGTTCTTCAGCAACTCAGAGAAGAGCATTTGGCAATCAGAGAGAAGAAAAATCCTGAGGACCCCATTGATTGGGATGATCTTAAAGCTATGAAGTTCACTCGTGCGGTGATCTTTGAAACATCAAGGCTGGCCACAATTGTTAATGGGGTCTTGAGGAAAACTACAAAGGACATGGAACTAAATGGCTTTCTCATTCCAAAAGGATGGAGGATCTATGTGTATACCAGAGAGATAAACTATGACTCTTTTCTCTATTCTGAACCATTGACCTTCAACCCTTGGAGATGGCTGGACAAAAACTTGGAGTCCCATAATTACTTCTTCATCTTTGGAGGTGGAACTAGACAATGTCCTGGCAAAGAACTGGGAATTGCTGAGATTTCTACTTTTCTACATTACTTTGTAACTAAATACAGGTGGGAAGAAGTTGGAGGAGATAAACTGTTGAAATTTCCAAGAGTGGAAGCTCCAAGTGGATTCCACATTAGGGTTTCATCTTACTGA 1389 43.84 MALAMVILALFLLLCFCAALLRWNEVRYSKKGLPPGTMGWPIFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVCMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGSAHKLMRAALLSVVSPTMIKDRLLPKVDEFMRSHLRNWDRQIIDIQDKTKEMALCSSLKQIAGIESGPLSESFIPEFFKLVLGTLSLPIDFPGTNYRQGIQARKSIIKLLQKLIDERRASKTEKDDMLGFFMSEENKYKLKDEEIIDQIITVLYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHLAIREKKNPEDPIDWDDLKAMKFTRAVIFETSRLATIVNGVLRKTTKDMELNGFLIPKGWRIYVYTREINYDSFLYSEPLTFNPWRWLDKNLESHNYFFIFGGGTRQCPGKELGIAEISTFLHYFVTKYRWEEVGGDKLLKFPRVEAPSGFHIRVSSY 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1281704 1285215 - Carg02210-RA Car15g00229 162066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00229 462 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 PANTHER CYTOCHROME P450 26 7 460 - -
Car15g00229 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Car15g00229 462 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 460 - -
Car15g00229 462 Pfam Cytochrome P450 34 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 Gene3D Cytochrome P450 24 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car15g00229 462 SUPERFAMILY Cytochrome P450 27 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02708 Car15g00229 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01120 Car-Chr14:9901423 Car15g00229 Car-Chr15:1281704 3.18E-76 dispersed
Car15g00229 Car-Chr15:1281704 Car16g00453 Car-Chr16:2884958 2.74E-89 dispersed
Car12g01026 Car-Chr12:10169492 Car15g00229 Car-Chr15:1281704 2.60E-73 transposed
Car15g00229 Car-Chr15:1281704 Car04g02708 Car-Chr4:20966689 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00229 K09590 - csv:101206858 853.588