Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00230 ATGGATGCGAATAGTTCGCGATTTCAGTCGTTTGGACAAACTGAGATTAACTGGGACAAGCTTGATAAAGCAAAATTTTATGGCATCGGAGCTGGTCTCTTTACCGGGATTACAGTCGCACTGTACCCTGTTTCCGTTGTAAAAACAAGGATGCAGGTTGCTGTAAAGGATTCTGCAGAGAAAAACGCGGCGTCTGTCGTTAAAGGCTTACTTAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATCACTGGTGCAATTCCTGCAAGGATTATCTTTCTTACCGCTTTGGAAACGACCAAAGTGGGAGCCTTTAAAATGGTTGAGCCATTTAAATTATCTGAACCCTCACAGGCTGCTATAGCAAATGGGTTAGCTGGCATGACTGCATCCCTTTTCTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAAAAGCTAATGGTTCAAGGATACTCGGGTAATGCAAGATATAATGGGGGCTTAGATGTTGCTCGTAAACTGATAAAGTCCGATGGCATCCGGGGATTGTATAAAGGTTTTGGGTTATCAGTTATAACCTACTCTCCATCTAGTGCTGTATGGTTCTTAGGCCAAAACTCAGCTTCCGAGAGCTTTGCTCCAAGCCATACCCAACTTATTTCAGTGCAAGCTGGGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGTATTACAACACCATTAGACACCATAAAGACTCGCTTACAGGTGATGGGCGATAAAGGGAAGACAGCAAGACAAATTGTCGAAAGCTTAATCGCGGAGGATGGATGGAAAGGTTTCTACAGGGGGCTGGGTCCTCGGTTCTTCAGCATGTCAGCCTGGGGAACCTCCATGATATTGGCTTACGAGTACTTGAAGCGCTTGTGTGCAAATGATGAACAGAGTTGA 927 44.66 MDANSSRFQSFGQTEINWDKLDKAKFYGIGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNAASVVKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAFKMVEPFKLSEPSQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNARYNGGLDVARKLIKSDGIRGLYKGFGLSVITYSPSSAVWFLGQNSASESFAPSHTQLISVQAGGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLKRLCANDEQS 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1296799 1300828 + Carg02211-RA Car15g00230 162067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00230 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 301 IPR018108 -
Car15g00230 308 Pfam Mitochondrial carrier protein 30 106 IPR018108 -
Car15g00230 308 Pfam Mitochondrial carrier protein 225 304 IPR018108 -
Car15g00230 308 Pfam Mitochondrial carrier protein 125 211 IPR018108 -
Car15g00230 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 19 107 IPR018108 -
Car15g00230 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02706 Car15g00230 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00305 Car-Chr9:1693339 Car15g00230 Car-Chr15:1296799 1.26E-79 dispersed
Car15g00230 Car-Chr15:1296799 Car17g00662 Car-Chr17:6132845 1.03E-72 dispersed
Car14g01383 Car-Chr14:11636042 Car15g00230 Car-Chr15:1296799 3.98E-93 transposed
Car15g00230 Car-Chr15:1296799 Car04g02706 Car-Chr4:20944912 2.37E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00230 K15121 - csv:101206140 560.066