Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car15g00301 | ATGGAATTTCAGGAGGGTTTGATGAAGTTCATGATCCATAGACACGTCAAACACAACTGGGTTTTGGAGAAGAATTCTCCACCGGTTGCAGTTTCAGAGATAACCAGTAGTCCTCGACGGAAATGGCGGATCTTCAATCGGTCTTCTTCTTCCCCATTTCCTTCGAAACCTCCCCAATCGAAGGAAATACCTAAAGAATTGCTCTGTCCCATTTCTGGGTCTTTAATGGCGGATCCTGTAATTGTCTCCTCTGGTCACACTTTCGAAGCCGCCTGTGTTCAGGTTTGTAAAGATTTAGGGTTGAAGCCGACTCTGTTAGACGGTTCCAACCCGGATTTCTCCTCTGTTATCCCAAATCTGGCTCTCAAATCCACTATTCTCAATTGGTGTAAGAATTCCTCTTCTGAATCCCCCAAACCCCTCGATTTCTCCTCCGCTGAAAAGCTCGTTCGTCAATTCATGGCGGCCCACACCAAAAGCGATGAGGAATTGATTCAAGGGATTGCAGAGAATCCTGTGGTTCGATTCAACCACGCCGCCACCGAAGTCACTCGTCGGACCTCTCATTTTCACTCGAGCTCCGATGAATCTGTAGGCGCCGCCGTTCAAACTTTGCCTCTTCCTCTCGCGACAAGGCCGAGTTGTTGTTCTTCGTCTTCTTCCTCTGACATCGAGGTAATCAGTGATCTGAACTTGCCCGAGGAAGAAGAGATCATCGCGAAGCTGAAAAGCTCTCAGGTTATTGAGATTGAAGAGGCTGTGACTGCGCTGAGAAAAATCACTAGAACTCGAGAGGATTCTAGGGTTCATCTCTGTTCTCCTCTGATTCTCTCTTCTCTGCGATCTCTCATCGTCTCGAGGTACACTGGCGTTCAGGTGAATTCAGTTGCAGCGCTTGTAAATCTGTCTTTAGAGAATTTGAACAAGGTTAAGATTGTAAGGTCGGGGATTCTCCCCAATTTGATCGATGTTCTGAAAGGGGGTTCACCGGAGGTTCAAGAACATGCCGCCGGCGCCATTTTCAGCTTAGCTCTCGAAGACGACAACAAAACCGCGATCGGCGTTTTGGGTGCTCTGCCGCCATTGATACGGCTGTTGGTATCCGAATCAGAGCAAACACGGCACGACTCGGCTCTTGCTCTTTATCACTTGTCGCACGTTCAGAGCAACCGTTCGAAGCTTGTGAAACTTGGGTCGGTGCCGGTCTTTCTCGGGATGGTGAAATCCGGCCATATGGCCGGCCGTATTTTACTGATATTGTGTAATTTAGCTGCTTGTTTTGAGGGCCGGGCGGCGTTGTTGGACTCCGGTGCAGTGGAGTGCTTGGTGGGGATGTTGAGGGAGAACGAGCTGGACACTGAGTCGACTCGGGAGAGCTGTGTGGCTGTCCTGTTCGGACTGAGTTACGGCGGTTTGAGGTTTAAGGGTCTGGCAAAAACCGCCGGAGCAATGGAGGTGTTCATGGCGGTAGAGAAAAATGGAAGCGAGAGATCAAAAGAAAAGGTGAAGAGAATCATGGAGTATATGAAAGCCAGAGATGAGGAAGCTGAGGATGTGAATTGGGAGGAGCTACTCGACTCGGGTTGTTTCGGCAGCCGTACTCGGTGTCGAATCGGTGCCGGAATGGACAGATCCACCGCGAACTCGTCGGAGTTCTGA | 1659 | 49.85 | MEFQEGLMKFMIHRHVKHNWVLEKNSPPVAVSEITSSPRRKWRIFNRSSSSPFPSKPPQSKEIPKELLCPISGSLMADPVIVSSGHTFEAACVQVCKDLGLKPTLLDGSNPDFSSVIPNLALKSTILNWCKNSSSESPKPLDFSSAEKLVRQFMAAHTKSDEELIQGIAENPVVRFNHAATEVTRRTSHFHSSSDESVGAAVQTLPLPLATRPSCCSSSSSSDIEVISDLNLPEEEEIIAKLKSSQVIEIEEAVTALRKITRTREDSRVHLCSPLILSSLRSLIVSRYTGVQVNSVAALVNLSLENLNKVKIVRSGILPNLIDVLKGGSPEVQEHAAGAIFSLALEDDNKTAIGVLGALPPLIRLLVSESEQTRHDSALALYHLSHVQSNRSKLVKLGSVPVFLGMVKSGHMAGRILLILCNLAACFEGRAALLDSGAVECLVGMLRENELDTESTRESCVAVLFGLSYGGLRFKGLAKTAGAMEVFMAVEKNGSERSKEKVKRIMEYMKARDEEAEDVNWEELLDSGCFGSRTRCRIGAGMDRSTANSSEF | 552 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 1625422 | 1627080 | + | Carg02282-RA | Car15g00301 | 162138 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car15g00301 | 552 | SUPERFAMILY | RING/U-box | 57 | 135 | - | - | |
Car15g00301 | 552 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 62 | 135 | IPR013083 | - | |
Car15g00301 | 552 | Gene3D | - | 233 | 508 | IPR011989 | - | |
Car15g00301 | 552 | SMART | Ubox_2 | 66 | 129 | IPR003613 | GO:0004842|GO:0016567 | |
Car15g00301 | 552 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 316 | 353 | IPR000225 | GO:0005515 | |
Car15g00301 | 552 | CDD | RING-Ubox | 68 | 111 | - | - | |
Car15g00301 | 552 | SUPERFAMILY | ARM repeat | 238 | 497 | IPR016024 | - | |
Car15g00301 | 552 | SMART | arm_5 | 426 | 469 | IPR000225 | GO:0005515 | |
Car15g00301 | 552 | SMART | arm_5 | 305 | 345 | IPR000225 | GO:0005515 | |
Car15g00301 | 552 | SMART | arm_5 | 264 | 304 | IPR000225 | GO:0005515 | |
Car15g00301 | 552 | SMART | arm_5 | 346 | 386 | IPR000225 | GO:0005515 | |
Car15g00301 | 552 | PANTHER | U BOX DOMAIN-CONTAINING | 39 | 541 | - | - | |
Car15g00301 | 552 | Pfam | Armadillo/beta-catenin-like repeat | 308 | 344 | IPR000225 | GO:0005515 | |
Car15g00301 | 552 | Pfam | Armadillo/beta-catenin-like repeat | 347 | 385 | IPR000225 | GO:0005515 | |
Car15g00301 | 552 | ProSiteProfiles | U-box domain profile. | 62 | 136 | IPR003613 | GO:0004842|GO:0016567 | |
Car15g00301 | 552 | Pfam | U-box domain | 63 | 133 | IPR003613 | GO:0004842|GO:0016567 | |
Car15g00301 | 552 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 38 | 39 | 541 | - | - | |
Car15g00301 | 552 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 357 | 399 | IPR000225 | GO:0005515 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car04g02629 | Car15g00301 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car10g00140 | Car-Chr10:669534 | Car15g00301 | Car-Chr15:1625422 | 9.24E-170 | dispersed | |
Car11g00114 | Car-Chr11:657657 | Car15g00301 | Car-Chr15:1625422 | 8.91E-172 | dispersed | |
Car15g00301 | Car-Chr15:1625422 | Car07g00299 | Car-Chr7:1544908 | 3.33E-36 | dispersed | |
Car13g00744 | Car-Chr13:8486765 | Car15g00301 | Car-Chr15:1625422 | 8.18E-155 | wgd | |
Car15g00301 | Car-Chr15:1625422 | Car18g00141 | Car-Chr18:771106 | 7.08E-152 | wgd | |
Car15g00301 | Car-Chr15:1625422 | Car04g02629 | Car-Chr4:20494167 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car15g00301 | - | - | cmax:111489531 | 1030.01 |