Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00304 ATGGCTCCGAGCTCTGTTGTTGTTACAATTGAGAAGCATAGCAGCTTCCCTTTAGTGGAAATCAATGGCTCTGATTCCTTGTTGCTTCCGGAGAAGCAGAAGGCTGCGAGTCCCAAGCAGCTCACATGGGTTCTTCTTCTCAAAGCCCATAGAGCTCTGTTTTTCTTCTCGTGGATGGCGATGACTATGAAGGCGGTGTTTGCTTCTGTTAAGAAACGCATTGCTCATGCGGATATTAACGAAGAGGATTCCAAAAGCCGTAAGTTATATAGATTCATTAAGGCGTTTCTTGCGATTTCAATTACGGGTTTGATCGTTGAAGTTGTTGCTCATTTCAAGAAGTGGAATCTGCGAATGATTCAGCCATTGGAGCTCGAAGTTCATGGGATTATTCAATGGTTTTACGTCTCGTGGCTTTCGTTTCGTGTTGATTACATTGCGCCAATGGTTCTCATGCTTTCCAAATTCTGCATTGTTCTGTTCTTGATCCAATCTCTCGATCGCCTTGTTCTCTGCTTCGGCTGCTTTTGGATCAAATACAAGAAAATCAAACCCACGATTCAAGATAACGCTTATGATTTGGAAGATGCTTCGAATTTTCCTTTGGTTCTTGTTCAAATCCCAATGTGTAATGAGAGAGAGGTCTATGCGCAATCGATTGCTGCTGCTTGTGAGCTTGACTGGCCGAGGAATCGGATTTTGATTCAAGTTCTTGATGATTCAGACGATGGAAATCTTCAGCGTTTGATCAAAGAAGAAGTTCTATCATGGAATGAAAAGGGTGTTAATATTGTTTATCGACATAGATTGATCCGAACTGGGTACAAAGCTGGGAATCTTCAGTCCGCCATGGCTTGTGATTATGTTAAAGATTATGAGTTCATAGCTATTTTAGATGCAGATTTCCAGCCCAACCCAGATTTCCTTAAGCTAACAATCCCTCATTTCAAGGGAAATCCTGAGGTGGGGCTTGTCCAAGCTCGTTGGGCGTTTGTTAACAAAGAAGAAAACTTGCTTACCAGACTCCAAAACATCAACTTGTGCTTCCACTTTGAAGTGGAGCAGCAAGTTAATGGGGTTTTTCTCAACTTCTTTGGATTCAATGGAACAGCAGGTGTTTGGAGAGCGAAAGCGCTCGAGGAATCCGGTGGCTGGCTTGAGCGCACGACGGTGGAGGACATGGATATCGCTGTTCGAGCACACTTGATGGGATGGAAATTCATCTTCCTCAATGATGTCAAGGTGCTTTGTGAATTGCCTGAATCATATGAAGCTTACAAGAAACAGCAACACCGTTGGCATTCTGGTCCTATGCAGCTCTTCAGATTATGCCTTCCTTCCATCATAACTTCAAAGATATCAATATGGAAGAAGACGAACTTGATATTCCTGTTCTTCCTCTTAAGAAAACTCATACTTCCCTTTTACTCCTTCACTTTGTTCTGCATAATTCTTCCATTAACAATGTTCATTCCAGAAGCAGAGTTGCCTCTGTGGGTAATCTGCTACATCCCAGTGTTCATGTCCTTACTAAACATTCTCCCATCCCCAAAATCCTTCCCTTTCTTGATCCCATATCTCTTGTTTGAGAACACCATGTCAGTAACAAAGTTCAACGCCATGATTTCGGGGCTATTCCAGCTCGGAAGCTCATACGAATGGGTCGTGACAAAGAAAACAGGACGATCATCAGAATCCGACTTCCTAGCATTAGCCGAACGAGAGTCGAAAACATGGAACGAGGAGAAGATTCTAAGGAGACATTCAGAGTCAGGGCTGGAGTTGTTGAGTAAATTGAACCAACAAGACAAGCAAATGGCTTCAAAGAAGAAGAGAAACAAGGTGTATAGAAAAGAGCTAGCTCTTGCCTTTCTGCTGCTCACTGCAGCAGCCAGAAGCTTGCTGTCAGCTCATGGAGTTCACTTCTACTTCTTGCTGTTCCAAGGGCTGTCGTTCCTGGTGGTGGGTTTGGACTTGATTGGCGAGCAAATGAACTGA 1998 43.44 MAPSSVVVTIEKHSSFPLVEINGSDSLLLPEKQKAASPKQLTWVLLLKAHRALFFFSWMAMTMKAVFASVKKRIAHADINEEDSKSRKLYRFIKAFLAISITGLIVEVVAHFKKWNLRMIQPLELEVHGIIQWFYVSWLSFRVDYIAPMVLMLSKFCIVLFLIQSLDRLVLCFGCFWIKYKKIKPTIQDNAYDLEDASNFPLVLVQIPMCNEREVYAQSIAAACELDWPRNRILIQVLDDSDDGNLQRLIKEEVLSWNEKGVNIVYRHRLIRTGYKAGNLQSAMACDYVKDYEFIAILDADFQPNPDFLKLTIPHFKGNPEVGLVQARWAFVNKEENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRAKALEESGGWLERTTVEDMDIAVRAHLMGWKFIFLNDVKVLCELPESYEAYKKQQHRWHSGPMQLFRLCLPSIITSKISIWKKTNLIFLFFLLRKLILPFYSFTLFCIILPLTMFIPEAELPLWVICYIPVFMSLLNILPSPKSFPFLIPYLLFENTMSVTKFNAMISGLFQLGSSYEWVVTKKTGRSSESDFLALAERESKTWNEEKILRRHSESGLELLSKLNQQDKQMASKKKRNKVYRKELALAFLLLTAAARSLLSAHGVHFYFLLFQGLSFLVVGLDLIGEQMN 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 1646301 1648712 + Carg02285-RA Car15g00304 162141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00304 665 Coils Coil 599 619 - -
Car15g00304 665 SUPERFAMILY Nucleotide-diphospho-sugar transferases 203 503 IPR029044 -
Car15g00304 665 Pfam Glycosyl transferase family group 2 295 500 IPR001173 -
Car15g00304 665 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 4 1 664 - -
Car15g00304 665 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 193 420 IPR029044 -
Car15g00304 665 PANTHER - 1 664 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02628 Car15g00304 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01200 Car-Chr1:11087078 Car15g00304 Car-Chr15:1646301 0 dispersed
Car08g00219 Car-Chr8:1375560 Car15g00304 Car-Chr15:1646301 0 dispersed
Car09g00462 Car-Chr9:2571021 Car15g00304 Car-Chr15:1646301 0 dispersed
Car12g00556 Car-Chr12:3712275 Car15g00304 Car-Chr15:1646301 0 dispersed
Car15g00304 Car-Chr15:1646301 Car17g01200 Car-Chr17:9173740 0 dispersed
Car15g00304 Car-Chr15:1646301 Car04g02628 Car-Chr4:20486062 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00304 K20887 - csv:101208151 1224.15