Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00417 ATGTTTAACAGTGATTTTGGCTTCGATCCTCTTCGTCTGGGAGAAGTGCCAGAGAACCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTGCCTGAGGCTTTGGGATTGGGCAACTGGGTGAAAGCTCAGGAATGGGCAGCAGTTCCTGGAGGCCAAGCTACCTACTTGGGGCAGCCAGTTCCATGGGGAACTTTGCCCACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTTGTAGAGCACCAGCGCAGCATGGAGAAAGACACCGAGAAGAAGAAGTACCCTGGCGGTGCTTTCGACCCATTGGGCTACTCAAAAGACCCTGTAAAGCTGAAGGAATACAAAGTCAAAGAGATCAAAAACGGTCGGTTGGCGCTGTTAGCTTTCGTCGGAATCTGTGTGCAACAAACGGCATACCCAGGAACAGGGCCATTGGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATTGGCGACATTATCATCCCCAGATCAATTTCGCCTTGA 555 50.63 MFNSDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHQRSMEKDTEKKKYPGGAFDPLGYSKDPVKLKEYKVKEIKNGRLALLAFVGICVQQTAYPGTGPLENLATHLADPWHNNIGDIIIPRSISP 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2174053 2175856 + Carg02400-RA Car15g00417 162254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00417 184 Pfam Chlorophyll A-B binding protein 3 149 IPR022796 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02495 Car15g00417 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00417 Car-Chr15:2174053 Car10g00187 Car-Chr10:901163 1.05E-35 dispersed
Car15g00417 Car-Chr15:2174053 Car04g02495 Car-Chr4:19815225 3.14E-131 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00417 K08907 - csv:101211428 364.77