Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00447 ATGGCAGCGCCAAAGCCTCGTACCACTCGGTCCAGGTCTCACAGGGATGTCCCGGATTTGGAGAAGATGGACGGTGCTTACAGTTGGGACGCCCTCGAATGGACGAAGATTGAGGCCGTTCCGCGGTCGGTTTCGCGTGTTAACTTTGATTGCTTGCTTCAAGCCGAACAAGTGATTGCAGAGGGATATGGTGTTGTTCTTGTAAATACTGATGAGGCGGGTACCTTGTTTGTAACCAATTTTCGTCTTCTATTTCTAAGTGAAGGAACCATGGATGTTATTGCCCTTGGCACCATACCACTGGCGGCAATTGATAAATTCAACAAAATAGTTGTGAAGACAAATTCTGTCTCTCGCCAATCTGAAAAGTCTTCATCATCTAGGCGACTTCTTCAGGTCATTGGAAAAGACATGAGAATTATTGTTTTTGGCTTTCGTCCAAGAACAAAACAGAGGCGTAAAGTATATGATGCATTATTGAAGTGTATGAAACCTGCAAGAATATGGGATCTATATGCATTCAAGTCCGGTCCATCCAAGTATAGTAATACAGACCCAAAAGTTCGCTTGCTAAATGAGTATTTTCGGCTTCTTGGAAAGGGTTCCCTACGTGCATCAATGGGTATGATTGAAGATGGATCATTTACATTGTCCAATGAATTGTGGAGAATAACTGACATCAATTCCAGTTATACTCTGTGCCAGACTTATCCATTTGCATTAGTTGTTCCAAAACACATTAGTGATGCAGAAATTTTGCAGGCTTCTACCTTTCGTGCTAGATGTCGATTGCCTGTTGTTTCGTGGTGCAATCCTGGTACTGGAGCTGTTCTTGCGCGTTCCTCCCAACCCTTAGTTGGTCTTATGATGAATATGAGAAGTAATACTGATGAAAAGCTTGTTGCTGCACTTTGCTCGTGTCTTGTTAGCGTTCAAGGGCCATCACGTAGGAAGCTTTATATAGCTGATGCAAGGCCTAGAAAAAATGCTTTAGCAAATGGAGCTATGGGTGGTGGGTCGGAGTCTTCGTCAAATTATTTTCAATCTGAGATAGTCTTTTTTGGGATTGACAACATACATGCAATGAGGGAAAGTCTTACCCGGCTCAGAGAGTACTTGGATACTCATGGTGAAAAATCATCTGATGGAATGTCATCATTCTTGAGACACGGCGGATGGACTTGGGGTGGGGGTAATCTTAGTAGTATGTCTGCATCTGTATCAACACTGGGAGATAGTGGCTGGTTAATCCATGTTCAAAGTGTCTTGGCTGGTTCCGCATGGATTGCTGCACGTGTTGCGTTGGAAAAAGCAACTGTGCTAGTTCATTGCAGTGATGGCTGGGACAGAACAACACAACTAGTTTCACTTGCTAGCTTACTACTTGATCCTTATTATCGGACGATCGCTGGATTTCAGGCACTGGTTGAAAAGGATTGGCTGGCATTTGGTCATCCTTTCTCAGATCGATCTGGCATGCCGACCATATCAGGAAGTGGTAACATGCCATATGAACTCTCTAGGCAGTCTTCAACTGGAAGTTTTTCTACTTCACCTATGCGTCAGCCATCGGGATCATTCACATCTCCAGCTTCCAGTCCTCCTCCCTCACAAACATCAAACAACTGTTCTCCCATATTTTTACAGTGGGTTGATTGTGTTTCTCAACTTTTGCGCATGTATCCCTTTGCTTTCGAGTTCTCTTCAGCATTCCTGGTGGATCTGTTGGATTGTATGCTTTCCTGTCGCTTTGGGAACTTCTTATGCAATTGTGAGAAGGAGCGGCAGCAATGTGCAGTTTCTGAAGTTTGCGGCTGTATATGGGCCTATTTAGCTGATTTACGAGCTTCGGAAGGAAGTTCGCACGTGCATTACAACCTTTTCTATGATCCTACCAAACATGAAGGTCCACTCTTACCTCCTGCAGCAGCTCTAGCTCCAACTCTCTGGCCACAATTCCATCTTCGTTGGGCTTGCCCTAAAGAATCCCAAGCTGGAGAACTTGAAGTCAGATGCAGGAAAATGGCTATAAAATTCTCTGAAATGCAGAAGGAGAAAGAAATAGCCGAGAGAAAAACGCAAGAGATGACGGCTGCCATGGAATCGATAAAATCAGAGTTACAGAACGAGAAGCAGTTAAGTGTATCTGCTAGGAATATTGCAAAAAGTGCAAACAAAGAATGTGAAGCCATAAAGAGAGCAATTCAGTCTCTAGGTTGCAAGGTTCAAGTCTCTAGTAATGGTTATTGTACTGTTGACATCGAGGGCGACCTGATGAAATCCAATCAGAAAAATCGTCCTGCTTCGAGAAGGGCTTCGCATCGTTCACTGCCTTCTAGTGAAGACAATGACCTCTCCCTTTCTATCACGGTTACAGAAGATGATGTTCCAAAGGACTCCCCCAGTCACGTCTGCGAAGCTCTTTGCCCATTGCGCACTCACGACAAAGCTTGCCGGTGGCCCGATGCTGGTTGTGCTCATTTGGGTAGCCAATTTATCGGACTAAAGGCAAATTTCGACGCATTCGATCAACTATCCATATATGATGGTTATTTCAAGCCAGAGTGA 2568 44.31 MAAPKPRTTRSRSHRDVPDLEKMDGAYSWDALEWTKIEAVPRSVSRVNFDCLLQAEQVIAEGYGVVLVNTDEAGTLFVTNFRLLFLSEGTMDVIALGTIPLAAIDKFNKIVVKTNSVSRQSEKSSSSRRLLQVIGKDMRIIVFGFRPRTKQRRKVYDALLKCMKPARIWDLYAFKSGPSKYSNTDPKVRLLNEYFRLLGKGSLRASMGMIEDGSFTLSNELWRITDINSSYTLCQTYPFALVVPKHISDAEILQASTFRARCRLPVVSWCNPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCSCLVSVQGPSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESLTRLREYLDTHGEKSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSVLAGSAWIAARVALEKATVLVHCSDGWDRTTQLVSLASLLLDPYYRTIAGFQALVEKDWLAFGHPFSDRSGMPTISGSGNMPYELSRQSSTGSFSTSPMRQPSGSFTSPASSPPPSQTSNNCSPIFLQWVDCVSQLLRMYPFAFEFSSAFLVDLLDCMLSCRFGNFLCNCEKERQQCAVSEVCGCIWAYLADLRASEGSSHVHYNLFYDPTKHEGPLLPPAAALAPTLWPQFHLRWACPKESQAGELEVRCRKMAIKFSEMQKEKEIAERKTQEMTAAMESIKSELQNEKQLSVSARNIAKSANKECEAIKRAIQSLGCKVQVSSNGYCTVDIEGDLMKSNQKNRPASRRASHRSLPSSEDNDLSLSITVTEDDVPKDSPSHVCEALCPLRTHDKACRWPDAGCAHLGSQFIGLKANFDAFDQLSIYDGYFKPE 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2341040 2352473 + Carg02430-RA Car15g00447 162284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00447 855 MobiDBLite consensus disorder prediction 506 538 - -
Car15g00447 855 MobiDBLite consensus disorder prediction 761 786 - -
Car15g00447 855 Coils Coil 679 706 - -
Car15g00447 855 ProSiteProfiles Myotubularin phosphatase domain. 199 654 IPR010569 -
Car15g00447 855 Pfam Myotubularin-like phosphatase domain 183 596 IPR010569 -
Car15g00447 855 ProSitePatterns Tyrosine specific protein phosphatases active site. 442 452 IPR016130 GO:0016311|GO:0016791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00447 K18081 - csv:101204839 1551.57