Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00460 ATGTTTGCTACCACTGGCATTCTGTTCTTCATCTGGGTTTTGAGCTCATCTCTGCCTCCTCCTGCCATGGCTACTTTCGCCTTCAATCTCACTGTTCCTCATCTTCTTCCAGATCCTGAAACTGTTGCTTATCAAGTTCAGAGGGCTGTGAACGATTCCTTTTCCCGGAGGCAAATGGTGTCCGTTAATTCGAAAGATCAATCCAGTTCCTGTCAAACTGGAAACCCTATCGACGATTGTTGGCGCTGCGACTCGAACTGGCAAGCCAATCGCCAACGACTCGCCGATTGCGGCATTGGATTCGGTCGAGACGCCATGGGAGGGAAGGGAGGTCAGATCTATGTTGTTACAGATTCCTCCGATTCCGACCCTGTGAACCCCCGCCCTGGAACTCTCCGCTACGCGGTGGTTCAAGACGAACCTCTCTGGATTGTTTTTGCTGCAGATATGACAATCAAACTCAAATACGAACTCATGATGAACAGTTACAAAACCCTAGACGGCCGCGGCGCCAATGTCCATATCACCGGGGGCGGTTGCGTCACACTTCAATACATCTCGAATGTAATCATCCATAACATTAACATCCACCACTGTATTCCTACCGGCCACACCAACATCCGGTCGTCCCCCACGCACATCGGATACCGAGGAAAGTCCGATGGCGACGGAATCTCGATCTTCAGCTCGCGCAACATTTGGATCGATCATTGCTCACTCTCGTACTGTACCGATGGCTTAATCGACGCCATAATGGGATCTACCGGAATCACGATCTCCAACAACTACTTCTCGCACCACGACGAGGTGATGCTGCTAGGGCACGACGATGGCTACTCGCCGGATTCGGCTATGCAGGTGACGATTGCGTTTAATTTGTTCGGCGAGAAGCTCGTTCAGAGGATGCCCCGGTGCCGGCGAGGATACTTTCATGTCGTTAACAACGACTTCCGATCGTGGGAGATGTACGCCATCGGCGGCAGCGGTGATCCGACTATCAACAGCCAAGGGAACCGGTATATTGCTCCGGGAAATCCCAACGCGAAGGAGGTGACGAAGCGCGTGGACACAAACGCGGGGGACTGGTCGGAGTGGAACTGGAGGACGGAGGGGGACATAATGGTAAATGGAGCATTTTTTGTGCCGTCCGGGGAAGGACTGAGCAATATGTACGTTAAAGCGTCGAGTGTGGCGCCCAAATCCGCCGCTCTCGTCGATCGCCTGACTCTCAACGCCGGTGTCTTCGGCGGGGCCAGGGAGAATAGACAGAGCTACTCGTATCCTGGAGACGAAAGCTCCTCTAGTTCGACTTCGAGTGGCAGCGATGGTGGTGGTGACTATTTCGGGATGATATTCGGTGGTGGCGGGGGGGTGAACAGTGCACCACCACCACCATGTCTTTCAGTTGTTAACATGCTCATGCTAAGTCTGCTTACTGTTTTAGTTTTGTACACGAACAGCTATGATTCTGCTTTATTATCATTGTAG 1488 52.35 MFATTGILFFIWVLSSSLPPPAMATFAFNLTVPHLLPDPETVAYQVQRAVNDSFSRRQMVSVNSKDQSSSCQTGNPIDDCWRCDSNWQANRQRLADCGIGFGRDAMGGKGGQIYVVTDSSDSDPVNPRPGTLRYAVVQDEPLWIVFAADMTIKLKYELMMNSYKTLDGRGANVHITGGGCVTLQYISNVIIHNINIHHCIPTGHTNIRSSPTHIGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLIDAIMGSTGITISNNYFSHHDEVMLLGHDDGYSPDSAMQVTIAFNLFGEKLVQRMPRCRRGYFHVVNNDFRSWEMYAIGGSGDPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIMVNGAFFVPSGEGLSNMYVKASSVAPKSAALVDRLTLNAGVFGGARENRQSYSYPGDESSSSSTSSGSDGGGDYFGMIFGGGGGVNSAPPPPCLSVVNMLMLSLLTVLVLYTNSYDSALLSL 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2447824 2451710 + Carg01697-RA Car15g00460 162297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00460 495 MobiDBLite consensus disorder prediction 421 441 - -
Car15g00460 495 MobiDBLite consensus disorder prediction 425 441 - -
Car15g00460 495 Pfam Pectate lyase 157 328 IPR002022 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car15g00460 Car18g00831 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01085 Car-Chr3:8811951 Car15g00460 Car-Chr15:2447824 0 dispersed
Car07g00884 Car-Chr7:4739540 Car15g00460 Car-Chr15:2447824 1.99E-93 dispersed
Car15g00460 Car-Chr15:2447824 Car18g00831 Car-Chr18:9330760 0 dispersed
Car15g00460 Car-Chr15:2447824 Car04g02458 Car-Chr4:19559525 0 wgd
Car15g00460 Car-Chr15:2447824 Car04g01467 Car-Chr4:8499852 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00460 K01728 - csv:101207535 848.195