Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00504 ATGGGGATTCAGACTATGGGGTCTCAGGCTGGAGGTGATCCGAATGGCAAACAATCACAGTTCCAGCCGTTGGTTCGTCAAAGCTCGCTCTATAATCTCACGTTGGATGAGGTCCAAAATCAGTTGGGAGATCTAGGAAAGCCGTTAGTCAGTATGAATCTCGACGAGCTTCTTAAGAATGTGTGGACTGCTGAGGCGAACCAAACGGTTGGTAAGGAGAATGAGGATAATACTGTCTTGGATAATCAAACGTCCCTACAACGTCAGGCTAGCCTTTCGTTGAATGGTGCTCTGAGTAAAAAGACTGTTGATGAGGTGTGGAGAGATATTCAACAAAGCAAAAATAGTGAGGAGAAGAAGTCTCGTGAACAGCAACCGACGTTGGGAGAGATGACGTTGGAGGATTTTCTAGTGAAAGCAGGGGTGGTTGCTGAAACGTCGTCGAATAAAAAAGGAGCGGGTTCTGTTGTTGAAATTGATGCAAATATCACGCCGCAGTTTCAACAAACGCAGTGGATGCAGTACCCGCAACCTCCGTATCAGTCTCAACAAGCAGCAATGATGGGGGTTTACATGTCGGGCCAGCCTATTCCCCAGCCGCTGCACGTGGGGGCTGGTGCTGTGATGGATGTTCCATATGTAGACAACCAGATGGCGTTACAAACTCCTTTAATGGGAACTTTATCGGACACACCGACATCTGGGAGAAAAAGAGGAGCGCCTGAAGACATGATTGAGAAAACTGTCGAGCGTAGACAGAAAAGGATGATAAAGAATCGGGAATCTGCCGCTCGTTCACGAGCAAGGAAGCAGGCATATACCAATGAACTGGAGAATAAAGTTTCACGTTTGGAAGAGGAGAACGAAAGGCTCCGGAAACGGAAGAACAAGACCAGGAAGAGTGGGTCTCCTTGCCTTTCCTCATTTATCAGCAGTAACTCCAGGCCTTGCGTCGGAGCTGGAAAAGATGCTACCTTTGGCACCCTCACCGGAGCCGAAGTATCAGCTTCGAAGAACATCGTCAGCGCCGTTCTAACTTGGACATCGACTCTGTCTTCCTCCTCCTCACACTCGTCGTAA 1080 48.43 MGIQTMGSQAGGDPNGKQSQFQPLVRQSSLYNLTLDEVQNQLGDLGKPLVSMNLDELLKNVWTAEANQTVGKENEDNTVLDNQTSLQRQASLSLNGALSKKTVDEVWRDIQQSKNSEEKKSREQQPTLGEMTLEDFLVKAGVVAETSSNKKGAGSVVEIDANITPQFQQTQWMQYPQPPYQSQQAAMMGVYMSGQPIPQPLHVGAGAVMDVPYVDNQMALQTPLMGTLSDTPTSGRKRGAPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKNKTRKSGSPCLSSFISSNSRPCVGAGKDATFGTLTGAEVSASKNIVSAVLTWTSTLSSSSSHSS 359
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
15 2749471 2753883 + Carg01653-RA Car15g00504 162341
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car15g00504 359 Pfam bZIP transcription factor 251 300 IPR004827 GO:0003700|GO:0006355
Car15g00504 359 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 301 IPR004827 GO:0003700|GO:0006355
Car15g00504 359 MobiDBLite consensus disorder prediction 257 309 - -
Car15g00504 359 MobiDBLite consensus disorder prediction 257 293 - -
Car15g00504 359 MobiDBLite consensus disorder prediction 1 23 - -
Car15g00504 359 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700|GO:0006355
Car15g00504 359 Coils Coil 267 301 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00153 Car-Chr5:769103 Car15g00504 Car-Chr15:2749471 2.78E-41 dispersed
Car11g01097 Car-Chr11:8627343 Car15g00504 Car-Chr15:2749471 8.24E-45 dispersed
Car11g01234 Car-Chr11:10096143 Car15g00504 Car-Chr15:2749471 1.78E-29 dispersed
Car12g00510 Car-Chr12:3385224 Car15g00504 Car-Chr15:2749471 9.34E-32 dispersed
Car15g00504 Car-Chr15:2749471 Car20g00146 Car-Chr20:799484 1.25E-33 dispersed
Car04g02953 Car-Chr4:22168537 Car15g00504 Car-Chr15:2749471 2.87E-71 transposed
Car09g00586 Car-Chr9:3309179 Car15g00504 Car-Chr15:2749471 1.29E-13 transposed
Car16g01181 Car-Chr16:10020970 Car15g00504 Car-Chr15:2749471 7.68E-19 transposed
Car15g00504 Car-Chr15:2749471 Car04g02403 Car-Chr4:19192285 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4804 PF00170 bZIP_1 1.90E-13 CL0018 Car TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00504 K14432 - csv:101213915 506.138