Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00509 ATGATGAACAACATGGGAATCTTTGAAGATATTAGCTTTTGCCAAAACCTTGAATATTTTTCAGCTCCTCCTGGGGAACAGGAGACAGCTCGGGAGCATGAAGCTGAGGCTACTTTGGAGGAAGATTACAGTGATGAAGAGCTGGATGTTGATGAGCTTGAGAGAAGGATGTGGCGAGACCGAATGCTTTTGAGGCGACTCAAGGAACAAAGCAAAGAGAAGGAAAGCGCTGACAATTCAAAGCAGCGTCAATCCCAGGAGCAAGCCCGAAGGAAGAAGATGTCTCGGGCTCAAGATTGCATCCTGAAATATATGTTGAAAATGATGGAGGTCTGTAAGGCTCAAGGATTTGTGTATGGGATCATTCCTGAGAAAGGAAAACCAGTAAGCGGAGCGTCCGATAATCTTCGTGCCTGGTGGAAAGAGAAAGTCAGATTCGATCGAAACGGTCCTGCAGCTATTGCCAAATATCAGGCTGAACATGCAATTCCTGGGAACAATGATGACTGCAATACAGTGACATCCACTCCTCATACTTTACAAGAGCTCCAAGACACAACCCTTGGATCACTTTTGTCAGCTCTGATGCAGCACTGCGATCCACCCCAAAGGCGTTTTCCATTGGAGAAGGGAGTTTCCCCACCGTGGTGGCCCACCGGAAACGAGGAATGGTGGCCTGAATTGGGACTACCTAACGATCAGGGGCCACCCCCTTATAAGAAGCCCCATGATCTGAAGAAGGCTTGGAAAGTCAGCGTTCTTACTGCTGTGATTAAGCATATGTCACCTGATATTGCGAAGATTCGCAAGCTCGTTCGTCAGTCTAAATGTTTGCAAGACAAGATGACTGCAAAGGAGAGTGCCACATGGTTGGCAATTGTGAACCAGGAAGAAGCTTTGGCTAGGAAATTGTATCCTGATAAATGCCCGCCTGTGCCGATATGTGGGAGCGGATCTCTTTTGATCAGTGACACTAGTGATTACGATGTTGAAGGAGTAGAAGATGAACCAAATGTCCAAGCAGGGGAAAGCAAACCCCACGATCTCAATTTCTTTAACATGGGTGCCCCTGGACCTAGAGAGAGGCTTGTGATGCCCCCTGTGGGAACTCAGATTAAGGAAGAATTCATGGAGAACAATTCGGACCTTAGTCGAAAGAGGAAGCAGCTGACAGATGAGTCGATTACAATAATGAATCAGAAGCTATATACTTGCGAGTATTCTCAATGCCCATATAACAGTCAGCGCCTCGGGTTTTTCGACAGGACTTCAAGAAACAACCACCAGTTGAATTGCCCATTTAGGCATGATTCTTCGCATATATTTAGCATGCCAAGCTTTCAAACTAATGGTGACAAATCATCATCCCCAGTTCCTCCATCGTTAAACCATTCTAAGCCACTGCCTATTCGGTCAATGAACCCGACTCCACCCTTCAGGGTATCAGGACTCGGACTTCCAGAAGACGACCAGAAAATGATTTCGGACCTTCTGAGTTGCTATGATTCTAACCTTCAACAGGACAAGAACACATTGAATCCCGGTAATGTCGATGCTAGAGGTGACCACAATCCCAACCAACAGCTGCCAAAATTCCAACCCCAAGTCGACATTAACATGTATGGCCAAGCAGCGATCGTGGGAAATAACATGCCAATACAGCACCCCGACATTTCTTCCACAAAACTTCCATTCGAAGAATACAAGGCGGCAGCATTTGATTCTCCGTTCAGCATGTATCCCAACGATAACATCCCAGACTTAAGATTTGGTTCTCCTTTTAACCTTGCATCAATTGATTATGCAGCAGCAGACACACCATTGCCCAAGCAAGACACACCCTTGTGGTACCTTTGA 1857 46.2 MMNNMGIFEDISFCQNLEYFSAPPGEQETAREHEAEATLEEDYSDEELDVDELERRMWRDRMLLRRLKEQSKEKESADNSKQRQSQEQARRKKMSRAQDCILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQAEHAIPGNNDDCNTVTSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGNEEWWPELGLPNDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARKLYPDKCPPVPICGSGSLLISDTSDYDVEGVEDEPNVQAGESKPHDLNFFNMGAPGPRERLVMPPVGTQIKEEFMENNSDLSRKRKQLTDESITIMNQKLYTCEYSQCPYNSQRLGFFDRTSRNNHQLNCPFRHDSSHIFSMPSFQTNGDKSSSPVPPSLNHSKPLPIRSMNPTPPFRVSGLGLPEDDQKMISDLLSCYDSNLQQDKNTLNPGNVDARGDHNPNQQLPKFQPQVDINMYGQAAIVGNNMPIQHPDISSTKLPFEEYKAAAFDSPFSMYPNDNIPDLRFGSPFNLASIDYAAADTPLPKQDTPLWYL 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2772226 2774082 + Carg01648-RA Car15g00509 162346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00509 618 Pfam Ethylene insensitive 3 51 298 IPR006957 GO:0005634
Car15g00509 618 Coils Coil 373 393 - -
Car15g00509 618 MobiDBLite consensus disorder prediction 443 461 - -
Car15g00509 618 MobiDBLite consensus disorder prediction 69 92 - -
Car15g00509 618 MobiDBLite consensus disorder prediction 24 46 - -
Car15g00509 618 MobiDBLite consensus disorder prediction 443 476 - -
Car15g00509 618 Coils Coil 36 87 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00877 Car-Chr10:5251306 Car15g00509 Car-Chr15:2772226 0 dispersed
Car11g00689 Car-Chr11:3864985 Car15g00509 Car-Chr15:2772226 0 dispersed
Car15g00509 Car-Chr15:2772226 Car16g00716 Car-Chr16:4581370 1.55E-108 dispersed
Car11g00714 Car-Chr11:4083376 Car15g00509 Car-Chr15:2772226 8.87E-131 transposed
Car15g00509 Car-Chr15:2772226 Car04g02399 Car-Chr4:19172289 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4805 PF04873 EIN3 2.80E-131 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00509 K14514 - csv:101214396 1091.26