Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00514 ATGGAGAAGAGCCCAGTTTATCCCCTTCATTCCCTGTTGATCTTTCTCTTCATTTTGAGTCTCTTTGTTCCAAGTTTGCCTCTTTTGACCGAGACTCGAGCATTGCTTCGTTTCAAAGAGAATCTCAATGATCCAATGGGGTTTCTTGATTCTTGGATTGATTCTGAATCCCCTTGTGGATTCTCTGGGATTACTTGTGATCGGGTTTCCGGGAAAGTCGTAGAGATTTCCTTGGAAAACAAGTCGCTTTCTGGTGAGATTTCTCCATCTATTTCTGTTCTGCAAAGTCTCACAATACTTTCGTTGGCCTCAAACCACATTTCTGGGGAGCTTCCCTACCAACTGATCAACTGTAGCAATATTAGAGTATTGAATCTCACTGACAATGAAATGGTTAGGAGGATTCCTGATCTTTCTCAGCTGAGAAAATTGAAGGTTCTAGATCTATCAATCAACTTCTTTTCTGGCCCATTCCCAATCTGGGTTGGAAATTTAACTGGATTGAATTCTCTGGGACTTGGTGAAAATGAGTTTGAGGCTGGTGACATACCAGAATCACTAGGAAATTTGAAGAACTTAACTTGGCTATATCTAGCAAATGCACAATTGAGAGGGGAAATACCAGAGTCTCTCTTTGAATTGAAGGCCTTAGAGACAATGGATCTTTCAAGGAACAAGCTTTCTGGTAAACTCTCCAAGTCAATATCCAAGTTGCAGAATCTGAACAAGCTTGAGCTTTTTGAAAACAAATTAACTGGAGAAATTCCACCAGAGATTTCAAACCTTACCCTTCTGCAAGAAATTGATATATCTGTAAATAGTTTTCATGGGCAGTTGCCAGACGAGGTTCGGAACCTCAGGAATTTGGTGGTTTTTCAGTCGTATGAAAACAACTTCTCAGGTAAGTTCCCTGAAGGGTTCGAAAATATGCAAAACCTTATTGCAATTTCAATCTATAGGAACAATTTTTCTGGAGAATTTCCAGCGAACTTCGGCAGATTTGCTCCACTCCTCAGCATCGACATATCTGAGAATCAATTTTCAGGGAGCTTCCCCAAGTTCTTGTGTGAGAATAGGAAGTTGCAGTTCTTACTTGCTCTGGATAATAGATTTTCAGGTGAGCTGCCACTTTCTTTAGCTGAGTGCAAATCACTGCAAAGATTCAGAATCAATAATAATCAAATGTCTGGCAGGATTCCAGATGGGGTATGGGCTCTTCCTAATACAAAAATTATTGATTTTAGTGACAATGAGTTTACTGGAGTTATAACCCCAAACATTGGTCTATCTACCAGCTTGGGCCAATTGATATTGCAAAACAATAAGTTTTCAGGTAACCTTCCATCAGAGCTGGGCAAGTTGACAAATTTAGAGAGGCTTTACTTGAGTAATAATGAGTTCAATGGAGAAATACCATCTGAAATTGGTTTCCTCGGGCAACTTTCATCATTCCACCTGGAAGTAAATTCTTTGAATGGATCAATCCCATTTGAGATTGGTAATTGTAAAAGACTCGTGGACATAAATTTTGCTCAAAACTCTCTTAGTGGTAGCATTCCATCTTCATTTTCACTAATCAGCTCTTTAAACTCGATGAACCTCTCAAGCAACGAACTTACAGGTCAAATCCCAGAATTCTTGGAGAAAATGGAACTAAGCTCGATAGATTTGTCGGGAAATCAGCTGTTTGGAAGAGTTCCATCCAGTCTTCTAGCAATGAGTGGAGACGAAGCCTTTTTGGACAACAAAGAACTCTGTGTTGATGAAAACTACAGAGAAAGGATAAATACCAGTCTGGTTACTTGTACTGGAAAGCATAGTCAGAAAGGGGTGCTTGTAGATAAACTTGTATTTTTCAGTATGATAGTCTCCATCTTGGTTTGTGTCTTAGCAGGGCTAGTGTTGGTAACTTTTAGTTACTTGAAGCACAGTGAGACTCGACTGGAGACCAATCAGGAACGGGACCAACAAGGAGCTCCAAAATGGAAAATTGCATCATTCCATCCAGTGGAAATTGATGCAGATGAAATATGCAGCTTTGAAGAAGACAATTTGATAGGGAGAGGAGGAACGGGAAAAGTTTATCGGTTGGATCTGAAGAACAATGGCGGTACAGTGGCTGTTAAGCAGCTCCGGAAAGGAGATGAAATGAAGGTTTTGGCAGCAGAAATGGAGATTCTGGGAAAGATAAGGCATAGAAACATCTTGAAGCTCTATGCCTGCTTAATGAGGGAAGGATCTAGTTATCTAGTTTTTGAATATATGACTAACGGAAACCTGTGTGAAGCACTTCAGAGACAGATCAAAGGTGGACAGTCTGGATTGAACTGGAATCAGAGGTACAGGATTGCATTGGGAGCAGCAAGGGGAATTGCTTACTTGCACCATGATTGTTCACCACCTATAATTCATAGAGATATAAAATCAACCAACATACTTCTTGATGGAGATTATGAACCAAAAATTGCTGATTTTGGAATTGCAAGAGTTGCAGATCAGTTCCTAATTGTTTCTGAGCACAGCACTTTTGCTGGCACTCACGGTTATCTTGCTCCTGAGCTAGCATATACTCCAAAAGTTTCAGAAAAGAGTGATGTGTACAGTTATGGTGTGGTGCTATTAGAATTGGTTACTGGAAGGAGACCAATAGAAGATGAATATGGAGAAGAAAAAGATATTGTCTACTGGGTCTCAACACACCTCAATGGCCGTGACAATGTCCTCAAGCTTCTGGACATCAAAGTTGCATCTGAAGTCGTCCAAAATGACATGATAAAAGTCCTGAAGATTGCTGTACTTTGCACAAGAAAGCTTCCATCACTTCGCCCTTCAATGAGAGAGGTAGTGAAGATGCTGTTAGACGCTGATCCCTACTCTTCTTCAACGTCCCTGAACAACAATTCAAATAAAAACAGTAAGGATTTTGTTTAG 2931 40.19 MEKSPVYPLHSLLIFLFILSLFVPSLPLLTETRALLRFKENLNDPMGFLDSWIDSESPCGFSGITCDRVSGKVVEISLENKSLSGEISPSISVLQSLTILSLASNHISGELPYQLINCSNIRVLNLTDNEMVRRIPDLSQLRKLKVLDLSINFFSGPFPIWVGNLTGLNSLGLGENEFEAGDIPESLGNLKNLTWLYLANAQLRGEIPESLFELKALETMDLSRNKLSGKLSKSISKLQNLNKLELFENKLTGEIPPEISNLTLLQEIDISVNSFHGQLPDEVRNLRNLVVFQSYENNFSGKFPEGFENMQNLIAISIYRNNFSGEFPANFGRFAPLLSIDISENQFSGSFPKFLCENRKLQFLLALDNRFSGELPLSLAECKSLQRFRINNNQMSGRIPDGVWALPNTKIIDFSDNEFTGVITPNIGLSTSLGQLILQNNKFSGNLPSELGKLTNLERLYLSNNEFNGEIPSEIGFLGQLSSFHLEVNSLNGSIPFEIGNCKRLVDINFAQNSLSGSIPSSFSLISSLNSMNLSSNELTGQIPEFLEKMELSSIDLSGNQLFGRVPSSLLAMSGDEAFLDNKELCVDENYRERINTSLVTCTGKHSQKGVLVDKLVFFSMIVSILVCVLAGLVLVTFSYLKHSETRLETNQERDQQGAPKWKIASFHPVEIDADEICSFEEDNLIGRGGTGKVYRLDLKNNGGTVAVKQLRKGDEMKVLAAEMEILGKIRHRNILKLYACLMREGSSYLVFEYMTNGNLCEALQRQIKGGQSGLNWNQRYRIALGAARGIAYLHHDCSPPIIHRDIKSTNILLDGDYEPKIADFGIARVADQFLIVSEHSTFAGTHGYLAPELAYTPKVSEKSDVYSYGVVLLELVTGRRPIEDEYGEEKDIVYWVSTHLNGRDNVLKLLDIKVASEVVQNDMIKVLKIAVLCTRKLPSLRPSMREVVKMLLDADPYSSSTSLNNNSNKNSKDFV 976
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2785649 2789237 - Carg01643-RA Car15g00514 162351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00514 976 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Car15g00514 976 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524
Car15g00514 976 Pfam Protein kinase domain 680 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00514 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672|GO:0006468
Car15g00514 976 ProSiteProfiles Protein kinase domain profile. 680 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00514 Car-Chr15:2785649 Car19g00389 Car-Chr19:5706454 0 dispersed
Car15g00514 Car-Chr15:2785649 Car04g02391 Car-Chr4:19144042 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89385 PF00069 Pkinase 1.40E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00514 - - csv:101215749 1586.24