Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00517 ATGCTCTTGAAGCCCTTCAACACCGTTGCCGTCGTATTCATGCTCGCTTTCGTGTTCTTCATCCTTTTCTTCACTGGCTTTCTCGAATTTCCGCCGGCATCCACTTCCATCGTACCGGCCGCCGATGATCTGAATCTATCCGTAGCCGAGTTCGCTTTCGATCCTTTCTCCGATTTGATCACCGCCTTTAAGAAATGGGACTCTCAGGTTGGTTGCGATCGATTTCGGGAGAAAATTAGCGGCGGTTTGGGAAATGGATCTTCGTCGACTTCGCTGCAGCTTGTCGGCGGCGAGTCTAATTCGGAATGTGGAGGGCTGAAACTGAATCATGTCTCTGTTTTGGTGAAAGGATGGACATGGATTCCTGATAATTTAGACAATTTGTATTCGTGTTCTTGTGGATTGAGCTGTCTTTGGACTAAATCTTCTGTTCTCGCCGATAAACCCGACGCCTTGTTCTTCGAGACCAGTACGCCTCCGCGTCAGAGGCTCAGGGGTGATCCTCTCCGTATTTATATGGATCTCGAGGCTGGTCGGAAGCGCTCAGGTTTTGAGGATCTATTCGTTAGTTATCATGCGGAAGACGATGTTCAGTCAACCTATGCAGGAGCACTCTTTCACAATGGTCGAAACTATCACGATACGCTCGTTTATTGGTCGTCGTCTCGTTGTCTTCCCCAACGAAATCAGCTTGCTAGGAAGCTTCTAAGCTTGCTGCCTCACCATTCATTTGGCAAGTGCTTGAACAATGTAGGCGGGCTTGACATGGCCCTTGATATGTACCCTGAATGTGCAAACGATGCCAGTGTCACCCCAAAATGGTGGGATCACTTGCATTGTGCAATGTCTCATTACAAATTCGTTCTAGCAATCGAAAACACGATGACCGAGAGTTACGTGACGGAGAAGCTATTTTATGCGCTAGATTCCGGTTCGGTTCCGATCTATTTTGGTGCTCCCAATGTCTGGGACTTTGTCCCTCCACATTCCATAATTGATGGGTCTAAATTCAGCTCGTTGGAAGAGTTAGCTTCTTATGTAAAACGACTTGCTGATGATCCGCTAGCTTATGCTGAATACCATGCTTGGAGACGATGCCGTGCGTTGGGCAACTATAGGAGGACCCGAGCTGCAAGCCTCGACACGCTGCCGTGCCGGGTATGTAATGCTGTGAGCAGAAGGGGTGGTAGAAATGGATGA 1200 48.5 MLLKPFNTVAVVFMLAFVFFILFFTGFLEFPPASTSIVPAADDLNLSVAEFAFDPFSDLITAFKKWDSQVGCDRFREKISGGLGNGSSSTSLQLVGGESNSECGGLKLNHVSVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSSVLADKPDALFFETSTPPRQRLRGDPLRIYMDLEAGRKRSGFEDLFVSYHAEDDVQSTYAGALFHNGRNYHDTLVYWSSSRCLPQRNQLARKLLSLLPHHSFGKCLNNVGGLDMALDMYPECANDASVTPKWWDHLHCAMSHYKFVLAIENTMTESYVTEKLFYALDSGSVPIYFGAPNVWDFVPPHSIIDGSKFSSLEELASYVKRLADDPLAYAEYHAWRRCRALGNYRRTRAASLDTLPCRVCNAVSRRGGRNG 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2801214 2804385 + Carg01640-RA Car15g00517 162354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00517 399 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 214 394 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00517 Car-Chr15:2801214 Car16g00318 Car-Chr16:1954005 6.30E-15 dispersed
Car15g00517 Car-Chr15:2801214 Car04g02390 Car-Chr4:19135058 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00517 K14412 - csv:101216230 741.495