Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00531 ATGGCCCTGAAATCTTTGATTCTGTTTCCGCCTGCGCTCGAAATTCCCAATTTACCCCCACGCCGTCGTAGTTTTGATGCGACTGTAGACGCCATTGAAGCAGTACCACCAAGCTCCATAAACACCTTCAAGTTTCAACCACATGCCATGGCTTCCATTCATTGGCTCTGTTACTTCGCCGGCACTCTAGCGGCTGACGCCGGCGATATCTCTGTTTCTGGTTTTGGAGATATCTTTGTGTCCATGGTCGAGATAGTTTTCAGAGCTCTGATGGAAGAGGCGATCCATCGATTTCTTGAACGATGGCTATTGTACCTTATAGTTATGTGCTTAAGCTTATCAGTCGCTGCTCTCTCTCCCGATGGAGAAGCGGTTCTTTCTCTCATTGCGGCTGCTGGTCCTTCTGCAACATCTTCTTCTTCTTCTGTTCTTGATTCTTGGAATCCATCTAGCCAAAACCCTTGTTCTTGGGAAGGAATCACTTGCTCTCCTCAGAACAGAGTCATTTCGTTATCTCTCCCAAAAACGTTCCTAAACCTATCGTTTTTGCCTCCGGAGTTGTCCTCTCTATCGTCTCTGCAGCTTCTCAATCTATCCTCCACCAATGTATCTGGCTCAATCCCTCCTTCTTTTGGCCTACTCACTCATCTTCGCCTGTTGGACCTCTCCTCCAACAATCTCTATGGGCCTATTCCTCCTCAGCTTGGTTCTCTTTCATCGCTACAATTCCTTTTCCTTAATTCCAATAAACTGTCTGGTAAGATTCCTCCTCAGCTTGCTAATCTGACTTCTCTGCAAAGTCTTTGCCTCCAAGACAATCTGTTTAATGGCTCCATACCATCGCAGTTAGGTTCTTTGTTGTCTCTTCAAGAGTTTCGAATAGGAGGGAATCCATATCTTTCTGGTGACATCCCACCGGAAATAGGGCTGCTTACTAATCTCACTACATTTGGGGCGGCGGCTACTGCCCTCTCCGGTGCCTTACCGTCTACATTTGGGAACCTAATCAACCTCCAAACTTTGTCACTCTATGACACTGAGATGTCTGGTTCTATACCTCCTGAGTTGGGATTTTGTTCTGAGCTAAGGGATTTGTATTTACACATGAACAAGCTTACTGGTAATATTCCTCCTCAGTTGGGTAAGCTGCAGAAACTTACTAGTTTGTTTCTATGGGGTAATGCTCTATCAGGGTTGATACCGTCTGAAATTTCGAATTGTTCGGCTCTTGTTGTTTTTGATGCTTCAGAGAACGATATTTCTGGTGAAATCCCAAGTGATTTAGGGAAATTAGTCGTTCTTGAACAGCTTCATTTATCTGATAATTCGATTTCGGGTTCGATACCATGGCAGTTGGGGAACTGCACAAGCTTAACTGCTCTTCAGCTTGATAACAATCAATTATCAGGTGTAATTCCATCCCAACTTGGCAATTTAAAATCCCTGCAAAGCTTTTTCTTATGGGGCAATTCTGTATCAGGAACTGTACCATCTTCCTTTGGTAACTGCACTGAGTTATATGCTCTTGATCTTTCAAGAAACAAGCTCTCTGGGATTATCCCAGAAGAAATTTTCAGCTTGAAGAAGCTGAGCAAGCTATTGCTCCTTGGAAATTCTTTATCTGGTGGGTTGCCTCCAAGTGTTGCAAATTGTCAATCATTGGTGAGGTTGAGGCTTGGAGAAAACCAGCTTTCAGGCAAGATTCCAAAGGAGGTAGGCCAGTTGCAAAATCTTGTCTTTCTTGACTTGTATATGAATCGATTTTCGGGTGGTCTTCCGTCTGAGATTGCTAATATTACAGTTCTTGAGCTACTTGATGTGCATAATAATTATATATCTGGGGAAATTCCTCACCAGCTTGGGGATTTGGTGAACTTGGAGCAGCTAGATCTCAGTCGGAACAGCTTCACTGGTGAAATTCCTCAGAGCTTTGGAAACTTCAGTTATTTGAATAAACTTATTCTCAGTAATAATCTACTGACAGGGTCAATACCAAAGTCTATTAAGAACCTGGAGAAACTAACTCTACTTGATTGGAGTAGCAACAATCTCTCTGGCAAGATACCACCAGAAATTGGTTATATGAAGAGCTTGTCTATCAGTCTGGACTTGAGCTCGAACGGGATAAGTGGAGAAATTCCCGAGTCGATATCGAGTTTGACACAGTTACAGTCACTTGATCTTTCCCATAACATGCTTTCTGGAAATATTAAAGTGTTGGGTCAGCTGACTAGTCTCACGTCCCTTAATATCTCCTACAACAATTTCTCTGGTCCAATGCCTGTAACACCATTTTTCAGAACACTATCAGAAGATGCATATTATCAAAACCTTAATCTTTGTGAATCACTTGATGGATTTACGTGTTCGTCGAGTTCGTTGCGTAGAAATGGCTTGAAGTCTGCAAAAGCTGCTGCATTAATCTCCATCATTCTTGTTGCAGTTGTCGTCGTACTTTTTGCTTTGTGGATGCTAGTTTCACGAAATCGAAAGTACATGGATGAGAAGTATTCAGGGACGTTGCCCTCGGCATCGGCTGCCGAGGACTTCTCTTATCCATGGACCTTCATCCCGTTTCAGAAGCTCAACTTTTCCATAGGTAACATCTTGGAATCCATGAAAGATGAAAATATAATTGGAAAAGGTTGTTCTGGAGTTGTTTATAAGGCAGATATGCCCAATGGTGAATTAGTTGCTGTAAAGAAACTATGGAAAACAAAGCAAGATGAAGAAGCAGTTGACTCTTGTGCTGCAGAGATTCAAATTCTCGGGCATATTCGACATCGTAACATCGTAAAGCTCATCGGTTATTGTTCCAATAGAAGTGTCAAGCTACTTCTCTACAACTACATTTCAAATGGTAACCTGCAACAACTCTTGCAAGGAAACAGAAATCTCGACTGGGAGACGAGGTATAAGATTGCGGTCGGGACAGCTCAGGGCCTGGCTTATCTTCATCATGATTGTGTGCCTGCAATTCTTCACAGAGATGTCAAGTGCAATAACATACTTCTAGACTCAAAGTTTGAAGCTTATTTGGCAGATTTTGGCCTGGCAAAGTTGATGAATGCTCCTAATTATCATCATGCGATTTCGAGAGTAGCCGGGTCTTACGGTTATATCGCCCCAGAATACGGATATACCATGAACATAACTGAGAAGAGCGATGTCTATAGTTATGGAGTTGTTTTACTAGAGATACTAAGCGGCCGTAGTGCAATTGAGACACAAGTTGGAGATGGCCTTCACATTGTTGAGTGGGTAAAGAAGAAGATGGCAAGCTTCGAACCGGCGATAACGATACTCGACTCAAAGCTCCAGAGTTTACCAGATCAAATGGTGCAAGAAATGCTTCAAACACTTGGAATAGCAATGTTTTGTGTGAACTCCTCCCCAGCAGAAAGGCCAACAATGAAGGAAGTGGTAGCATTGTTGATGGAGGTGAAGAGTCCTCCAGAAGAATGGACCAAAACCTCCCAGCCTCTAATCAAGCACTCCTCAATGAATGTCGACGATCTTCATCGCCGTTCAGTGTTTTCAATGCTCCACGATGCAGGCACGGATCTCGTGAAGCAGCAGCGAAGCAGCGGGAATAAGTGGATCTGTGCAGTCTGCAACGAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCGATGGCTAAAGACGTCCGTAAGTTCGTACAGAGCTTCAATATGTCTCGGAAATATGCGGATGAACAGACGAAAGTCGATGAGATATTTGATGAGGAAATTGTTGACGAGGATCAGCTTGATTTCAACGCGAAGAGAAAAAGACGTAGCGATTGGAGTGAGTACCTCGATCTCGAGGAAGATCGCAGCCAAACTGGAAGAGAAAACGAACGAGAATTAGGGAGTGATTTTGCTGATGGAAAGTTTGTGACGGAGCTTCCAGAAGAAAAAACCAGGAAGCACTGTTCAACGAGCTGTTCAAGCAGGCCGGAAGGTGGAGAAGGAAAAAGATTTTACAGACCAGTTTTCCCGAAGAGGACACACATTGCCAAGAATTCAGCCATTCAAGCATCAAAATGGAGTAAAGGCGTCCGAGAAGATGATGAAAAAGGCAGAAAGTTGAGCAAAAACAGTCGTAAAATTGCAGATGAGATTCGAAACTGGGAATCGCCGTCGTCAAAAGACGATGAAAATGCTTGCATATTAGCCAAGGTAGGAGGTCCTTCTTCCAAGTGGAGTGAATACATAACTGAAGATGACAACTGCGGAGGAGGCAGAAAGGGAGAAAATATGGGAACAGAACAGGACATGGATACCTTGAAGATGATGATAAATGATGAAATTGTTGAAGATGATATCCACCCTGATTTCAAATGA 4350 43.33 MALKSLILFPPALEIPNLPPRRRSFDATVDAIEAVPPSSINTFKFQPHAMASIHWLCYFAGTLAADAGDISVSGFGDIFVSMVEIVFRALMEEAIHRFLERWLLYLIVMCLSLSVAALSPDGEAVLSLIAAAGPSATSSSSSVLDSWNPSSQNPCSWEGITCSPQNRVISLSLPKTFLNLSFLPPELSSLSSLQLLNLSSTNVSGSIPPSFGLLTHLRLLDLSSNNLYGPIPPQLGSLSSLQFLFLNSNKLSGKIPPQLANLTSLQSLCLQDNLFNGSIPSQLGSLLSLQEFRIGGNPYLSGDIPPEIGLLTNLTTFGAAATALSGALPSTFGNLINLQTLSLYDTEMSGSIPPELGFCSELRDLYLHMNKLTGNIPPQLGKLQKLTSLFLWGNALSGLIPSEISNCSALVVFDASENDISGEIPSDLGKLVVLEQLHLSDNSISGSIPWQLGNCTSLTALQLDNNQLSGVIPSQLGNLKSLQSFFLWGNSVSGTVPSSFGNCTELYALDLSRNKLSGIIPEEIFSLKKLSKLLLLGNSLSGGLPPSVANCQSLVRLRLGENQLSGKIPKEVGQLQNLVFLDLYMNRFSGGLPSEIANITVLELLDVHNNYISGEIPHQLGDLVNLEQLDLSRNSFTGEIPQSFGNFSYLNKLILSNNLLTGSIPKSIKNLEKLTLLDWSSNNLSGKIPPEIGYMKSLSISLDLSSNGISGEIPESISSLTQLQSLDLSHNMLSGNIKVLGQLTSLTSLNISYNNFSGPMPVTPFFRTLSEDAYYQNLNLCESLDGFTCSSSSLRRNGLKSAKAAALISIILVAVVVVLFALWMLVSRNRKYMDEKYSGTLPSASAAEDFSYPWTFIPFQKLNFSIGNILESMKDENIIGKGCSGVVYKADMPNGELVAVKKLWKTKQDEEAVDSCAAEIQILGHIRHRNIVKLIGYCSNRSVKLLLYNYISNGNLQQLLQGNRNLDWETRYKIAVGTAQGLAYLHHDCVPAILHRDVKCNNILLDSKFEAYLADFGLAKLMNAPNYHHAISRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAIETQVGDGLHIVEWVKKKMASFEPAITILDSKLQSLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSPPEEWTKTSQPLIKHSSMNVDDLHRRSVFSMLHDAGTDLVKQQRSSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQTKVDEIFDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELGSDFADGKFVTELPEEKTRKHCSTSCSSRPEGGEGKRFYRPVFPKRTHIAKNSAIQASKWSKGVREDDEKGRKLSKNSRKIADEIRNWESPSSKDDENACILAKVGGPSSKWSEYITEDDNCGGGRKGENMGTEQDMDTLKMMINDEIVEDDIHPDFK 1449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 2878251 2885698 - Carg01626-RA Car15g00531 162368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00531 1449 Pfam Protein kinase domain 875 1142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00531 1449 MobiDBLite consensus disorder prediction 1345 1387 - -
Car15g00531 1449 ProSitePatterns Protein kinases ATP-binding region signature. 879 902 IPR017441 GO:0005524
Car15g00531 1449 MobiDBLite consensus disorder prediction 1352 1384 - -
Car15g00531 1449 Pfam Leucine Rich Repeat 625 647 IPR001611 GO:0005515
Car15g00531 1449 Pfam MRN-interacting protein 1192 1277 IPR032739 -
Car15g00531 1449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 993 1005 IPR008271 GO:0004672|GO:0006468
Car15g00531 1449 ProSiteProfiles Protein kinase domain profile. 873 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00531 1449 MobiDBLite consensus disorder prediction 1403 1426 - -
Car15g00531 1449 Pfam Leucine rich repeat N-terminal domain 120 163 IPR013210 -
Car15g00531 1449 ProSiteProfiles Leucine-rich repeat profile. 722 744 IPR001611 GO:0005515
Car15g00531 1449 Pfam Leucine rich repeat 481 540 IPR001611 GO:0005515
Car15g00531 1449 Pfam Leucine rich repeat 701 756 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00531 Car-Chr15:2878251 Car17g00104 Car-Chr17:620658 0 dispersed
Car04g01899 Car-Chr4:11148289 Car15g00531 Car-Chr15:2878251 2.89E-13 transposed
Car07g00394 Car-Chr7:2016637 Car15g00531 Car-Chr15:2878251 4.35E-12 transposed
Car15g00531 Car-Chr15:2878251 Car04g02375 Car-Chr4:19059500 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89387 PF00069 Pkinase 1.80E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00531 - - csv:101212866 1849.33