Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00564 ATGAGGCTCTCCGCCACTCTCCGCCTCTCTCCGCCTTCCCATTCTTGTGTTTTTGAGTTTCCCATTCTTGTCTCCCTCTCCGATTCATTTCTCGCCGGGAATAGAGCCGCCAACGATCGGAATCACTTCCACTACCGTCCTCCTCTTCCGTTTTCTTCTGTATCCTTATACATTGTAGAGCAAAATCTGACTGCCATAGATTTCCTGCGCTCTCTACATTTCCTGCGCTCTCTACCTCACGCACCGCCGAACGCCCAAAACAGAGGAAGCACAGTGGCGGAGTTGTGTGGATTTCCATCGTCTTCAATTCGAAGCCGAAATCTCCTGTTCTTCCATTTTAGTATGTCGACTTTAACGATCCTCCTTTTCTTCTTGATTCCCTCCAATTTTGTCCGTCTTTCTCTTTGTTTCTTGCCTGATCAAAACGTCACCCTCTCCGGTGATGCGCATTTCAGAAACAATGCCATGCTTCTCACCCAAGAAACCAATTGCCTTCCCTTTTCTTCTTCCAACTCCCCTGCCTCCTCTGCCTCTGTCTCTTCTGGCGTTGGCGCCGCCTTCTACAACAACCCGATTCGCTTTCTTGATTTCTCCACCAATTCCACCGCTTCTTTTTCCACTAAATTCTTCCTCACCGTCGTTCCCACCCCACTTTGCCCTTCCGCCGATGGAATCGCTTTCCTCATTACCTCCGATTCCGAATCTTTCAGCCGCTCTAATGGGTATATGGGCCTTCCCGATCCCCCGCTAAATTCCCACCACTCTTTCATCGCTGTCGAATTCGACACCAGTTTCAACGCTGATCTTGGAGACATTAATGACAACCATCTTGGCTTTGATGTCAACTCTGCGACCTCTTTGTCTTCTGTGGATTTTGGGTCCAGAGGCATTTTCCTCAAAAATGGGAGAAAGATTACCGCATGGATTGAGTACAAGGAAGACTCGAAAAAGATCCATGTCTGGGTTGGCTATTCGCAGACAAAGCCTGAAAATCCTCTTCTTGTTGTGGAGGTTGACCTTTCCAAGCAATTTAAGGAGTTCATGTATGTGGGGTTCTCTGCTTCTAACGGACGGGGCTCTGCTCTTTACATTGTTGATCAATGGCAATTTAGAACTTTTGGGTTGGTACCTTCTTTGAGTTCTGTTGATACCATTACTGAAGGAGACTGTTTCTTGTGCGCACCGGAGGATTCGAGTGCGCATAGCAATCGTTCTGTCAACGCTCGTCAACGGAGGAAGATGATTGGAGAGATAACCCTTGGTTTAGGAGGTTTAATTGCATTTCTTTGCTCTATTATTGTCATTGTTGCTTTGATTAGTTTTATCTTGATGGATAAATTGAGGGGTAGAATGTGCATATGCATAGCAACTCCCGAAACCAGTCAAGTTGAGACCAACAGAGTTCCATTGAGATTATCCCTTGGGGAGGTAAAGTTGGCTACAATGGACTTTAATGAAGATAGAATTGTTGGGAGAGGTGGTTCTGCAACTGTTTACAAAGGATGTCTTCCAGCCGGTGAAGAAGTGGCTGTTAAACGATTCGCACCAGACATGGCGAACAATCGTATGTACAATCCTTTCACCACCGAGTTTGCAACAATGGCGGGGTGCTTACGACACAAGAATTTGGTTCAGCTTCACGGATGGTGTTGCGAGGCAAACGAGTTGGTTCTTGTTTACGAGTTCTTGGCCAATGGTAGCCTCGGCGAACTTCTTCATAAGCGCTCACAGAATTCACAGTTTGTTCTTCCTTGGAAGAAAAGGGTTTCCATAGTTCTTGGCATTGCTTCTGCATTGACATATCTCCATGAAGAGTATGAGAGACAGATTATCCATAGAGATGTAAAGACCTGCAACATTATGATTGATGCAGATTTCAACGGTAAACTCGGGGATTTCGGTCTAGCAGAAGTGTATGCACGCAATTCACTCAGAAGGGAAGCAACTATACCCGCTGGAACAATGGGATATCTCGCACCTGAATACGTTTATTCTGGAGTTCCCACTGTCGAAACCGATATTTACAGCTTTGGAGTCGTGTTGCTCGAAGTAGCCTCGGGAAGGAGGGCTGTAATCGAAGAGGGGACCATGCTGGTCGATTGGATTTGGAATCTATGGGAAATGGGGACACTAACTGAAGCATCTGATTCAAAGTTGACGGGAAAATACAATGTAGTAGAAATGGAGAGAATGCTAATGGTGGGACTGAATTGTGTACACCCAAATTATGTAAAGCGGCCAACTGTGAGAGAAGCTGCAAAGATCCTTAAAGGGAAAGCACCACTTCCTGTACTGCCACCAAGGAAGCCAAGGGTCCGCATCAAGTCTGCTGTTCCTGATGATTTTGAGGATAGCATAGATAGTCCTCCTGACGATAATCCCAGCCTCGACGAGTGGATGACCCCGAAGAGTCAATTTTATAGCTGA 2427 46.23 MRLSATLRLSPPSHSCVFEFPILVSLSDSFLAGNRAANDRNHFHYRPPLPFSSVSLYIVEQNLTAIDFLRSLHFLRSLPHAPPNAQNRGSTVAELCGFPSSSIRSRNLLFFHFSMSTLTILLFFLIPSNFVRLSLCFLPDQNVTLSGDAHFRNNAMLLTQETNCLPFSSSNSPASSASVSSGVGAAFYNNPIRFLDFSTNSTASFSTKFFLTVVPTPLCPSADGIAFLITSDSESFSRSNGYMGLPDPPLNSHHSFIAVEFDTSFNADLGDINDNHLGFDVNSATSLSSVDFGSRGIFLKNGRKITAWIEYKEDSKKIHVWVGYSQTKPENPLLVVEVDLSKQFKEFMYVGFSASNGRGSALYIVDQWQFRTFGLVPSLSSVDTITEGDCFLCAPEDSSAHSNRSVNARQRRKMIGEITLGLGGLIAFLCSIIVIVALISFILMDKLRGRMCICIATPETSQVETNRVPLRLSLGEVKLATMDFNEDRIVGRGGSATVYKGCLPAGEEVAVKRFAPDMANNRMYNPFTTEFATMAGCLRHKNLVQLHGWCCEANELVLVYEFLANGSLGELLHKRSQNSQFVLPWKKRVSIVLGIASALTYLHEEYERQIIHRDVKTCNIMIDADFNGKLGDFGLAEVYARNSLRREATIPAGTMGYLAPEYVYSGVPTVETDIYSFGVVLLEVASGRRAVIEEGTMLVDWIWNLWEMGTLTEASDSKLTGKYNVVEMERMLMVGLNCVHPNYVKRPTVREAAKILKGKAPLPVLPPRKPRVRIKSAVPDDFEDSIDSPPDDNPSLDEWMTPKSQFYS 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3132758 3135615 + Carg01591-RA Car15g00564 162401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00564 808 ProSitePatterns Protein kinases ATP-binding region signature. 490 512 IPR017441 GO:0005524
Car15g00564 808 Pfam Legume lectin domain 139 372 IPR001220 GO:0030246
Car15g00564 808 ProSiteProfiles Protein kinase domain profile. 484 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00564 808 Pfam Protein kinase domain 484 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00564 808 ProSitePatterns Legume lectins beta-chain signature. 257 263 IPR019825 -
Car15g00564 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Car15g00564 808 MobiDBLite consensus disorder prediction 776 808 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00564 Car-Chr15:3132758 Car16g00925 Car-Chr16:7586734 2.00E-145 dispersed
Car15g00564 Car-Chr15:3132758 Car04g02346 Car-Chr4:18854041 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89390 PF00069 Pkinase 3.30E-40 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00564 - - cmos:111444851 1432.16