Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car15g00584 | ATGTCTTCGAGGGATCCTAACGCCATCTTCAGTGGAGGCGGTATCAGTTTTCTCAATGGAAATCAGACTGGAAAGTTCAGCTATGGGTATTCTAGTTTCAAAGGAAAAAGGGCTTCAATGGAGGACTTCTATGAAACAAGAATTTCTGAAGTTGACGGGCAGATGGTCGCTTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCAGAACAGCTGAATACCTTAAGCGCAATCTTTTCAAGAACCTAAGTAGCCACCCAGACTTTATCAAAGACACAAAGACTGCCATCATTGAGGTCTTTAAACAGACCGATGCCGATTATATTAACGAAGAGAAAGGGCAGCAGAAAGATGCTGGCTCAACTGCATCAACTGCTGTTCTGTTAGGAGATCGTCTCCTTGTTGCAAATGTTGGGGATTCCAGAGTAGTTGCGTCTAGAGCTGGTTCAGCTATTCCCCTCTCTATTGATCACAAACCTGATAGATCAGATGAACGAGAAAGGATTGAACAAGCTGGAGGTTTCATTATTTGGGCAGGAACTTGGAGGGTTGGTGGTATTCTAGCCGTTTCGCGTGCCTTTGGAGATAAGCTACTCAAACCATATGTTGTTGCTGATCCTGAAATACAGGAAGAAGAAATTGACGGTGTAGATTTTATTATCATTGCAAGTGATGGACTTTGGAATGTTTTATCAAATGAGGATGCGGTAGCATTGGTGCAACACATCCAAGATACAGAAGTGGCATCAAGAACACTAATCCAAGAAGCGTATGCTCGAGGGAGTTCCGACAACATTACATGTGTCATTGTACGATTTGGTCTATCGTAA | 828 | 42.75 | MSSRDPNAIFSGGGISFLNGNQTGKFSYGYSSFKGKRASMEDFYETRISEVDGQMVAFFGVFDGHGGSRTAEYLKRNLFKNLSSHPDFIKDTKTAIIEVFKQTDADYINEEKGQQKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERERIEQAGGFIIWAGTWRVGGILAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVLSNEDAVALVQHIQDTEVASRTLIQEAYARGSSDNITCVIVRFGLS | 275 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 15 | 3224526 | 3229324 | + | Carg01571-RA | Car15g00584 | 162421 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car15g00584 | 275 | ProSiteProfiles | PPM-type phosphatase domain profile. | 27 | 272 | IPR001932 | - | |
| Car15g00584 | 275 | Pfam | Protein phosphatase 2C | 28 | 265 | IPR001932 | - | |
| Car15g00584 | 275 | ProSitePatterns | PPM-type phosphatase domain signature. | 58 | 66 | IPR000222 | GO:0043169 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car04g02329 | Car15g00584 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car01g01296 | Car-Chr1:11667146 | Car15g00584 | Car-Chr15:3224526 | 3.50E-124 | dispersed | |
| Car06g00012 | Car-Chr6:139141 | Car15g00584 | Car-Chr15:3224526 | 1.10E-44 | dispersed | |
| Car09g00337 | Car-Chr9:1867742 | Car15g00584 | Car-Chr15:3224526 | 2.63E-130 | dispersed | |
| Car15g00584 | Car-Chr15:3224526 | Car16g00058 | Car-Chr16:387816 | 4.32E-114 | dispersed | |
| Car15g00584 | Car-Chr15:3224526 | Car04g02329 | Car-Chr4:18764937 | 6.36E-33 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car15g00584 | K17506 | - | csv:101220053 | 509.99 |