Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car15g00618 | ATGGAGTTAATGAAAGCAGGAGACGTAGAAGAAGAAGAAGAAGAAGAAGTGCAGCAGCAGCAGCAGCATTTCCACGTGCTGGCAGTGGACGACAGCCTACTGGAAAGAAAGGTTCTGGAAAAGCTCTTAACAATTTCTTCTTCATGCGAAGCAGTGACCTGCGTGGAGTCTGGAGATAAGGCTCTAAGGTATCTGGGCCTGCTTGATGACCTTGACAACTTTTCTTCCCCATTTTCTCCCCCACGTCTCTCCCAACAACAGGAAGTCAAAGTCAACCTAATCATGACAGATTACTGCATGCCTGGAATGAGTGGCTATGATCTACTCAAACGACTCGAGGGATCTTACTGGAAAGACATTCCTGTTGTTGTCATGTCATCAGAGAACGAACCTTCAAGAATCAACATGTGTTTGGAAGAAGGGGCAGAGGAATTCCTTTTGAAGCCTCTTCAACTTTCGGACGTGAAGAAGCTCGAGCCTCACCTTCAAAAGTCCCTCACTCGCTGTTCTGCAGAAATAAAGGAACAAGAAACCGTTGGATTTGGAATTGAAATCGGAATCGGAATCGGAATCACTGATTCCGATGTCGTCGACGACGGAAACAACTCAGATACTAACAAGAACGACAATAGCGATCTGAAAGGCGACCGAAGCTGA | 657 | 46.12 | MELMKAGDVEEEEEEEVQQQQQHFHVLAVDDSLLERKVLEKLLTISSSCEAVTCVESGDKALRYLGLLDDLDNFSSPFSPPRLSQQQEVKVNLIMTDYCMPGMSGYDLLKRLEGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGITDSDVVDDGNNSDTNKNDNSDLKGDRS | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 3430886 | 3433087 | - | Carg01537-RA | Car15g00618 | 162455 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car15g00618 | 218 | ProSiteProfiles | Response regulatory domain profile. | 25 | 163 | IPR001789 | GO:0000160 | |
Car15g00618 | 218 | Pfam | Response regulator receiver domain | 26 | 156 | IPR001789 | GO:0000160 | |
Car15g00618 | 218 | MobiDBLite | consensus disorder prediction | 196 | 218 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car04g02296 | Car15g00618 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car15g00618 | Car-Chr15:3430886 | Car15g00784 | Car-Chr15:4455898 | 1.45E-52 | dispersed | |
Car15g00618 | Car-Chr15:3430886 | Car04g02296 | Car-Chr4:18440015 | 7.99E-97 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4816 | PF00072 | Response_reg | 5.50E-18 | CL0304 | Car | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car15g00618 | K14492 | - | csv:101216267 | 261.151 |