Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00618 ATGGAGTTAATGAAAGCAGGAGACGTAGAAGAAGAAGAAGAAGAAGAAGTGCAGCAGCAGCAGCAGCATTTCCACGTGCTGGCAGTGGACGACAGCCTACTGGAAAGAAAGGTTCTGGAAAAGCTCTTAACAATTTCTTCTTCATGCGAAGCAGTGACCTGCGTGGAGTCTGGAGATAAGGCTCTAAGGTATCTGGGCCTGCTTGATGACCTTGACAACTTTTCTTCCCCATTTTCTCCCCCACGTCTCTCCCAACAACAGGAAGTCAAAGTCAACCTAATCATGACAGATTACTGCATGCCTGGAATGAGTGGCTATGATCTACTCAAACGACTCGAGGGATCTTACTGGAAAGACATTCCTGTTGTTGTCATGTCATCAGAGAACGAACCTTCAAGAATCAACATGTGTTTGGAAGAAGGGGCAGAGGAATTCCTTTTGAAGCCTCTTCAACTTTCGGACGTGAAGAAGCTCGAGCCTCACCTTCAAAAGTCCCTCACTCGCTGTTCTGCAGAAATAAAGGAACAAGAAACCGTTGGATTTGGAATTGAAATCGGAATCGGAATCGGAATCACTGATTCCGATGTCGTCGACGACGGAAACAACTCAGATACTAACAAGAACGACAATAGCGATCTGAAAGGCGACCGAAGCTGA 657 46.12 MELMKAGDVEEEEEEEVQQQQQHFHVLAVDDSLLERKVLEKLLTISSSCEAVTCVESGDKALRYLGLLDDLDNFSSPFSPPRLSQQQEVKVNLIMTDYCMPGMSGYDLLKRLEGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHLQKSLTRCSAEIKEQETVGFGIEIGIGIGITDSDVVDDGNNSDTNKNDNSDLKGDRS 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3430886 3433087 - Carg01537-RA Car15g00618 162455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00618 218 ProSiteProfiles Response regulatory domain profile. 25 163 IPR001789 GO:0000160
Car15g00618 218 Pfam Response regulator receiver domain 26 156 IPR001789 GO:0000160
Car15g00618 218 MobiDBLite consensus disorder prediction 196 218 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02296 Car15g00618 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00618 Car-Chr15:3430886 Car15g00784 Car-Chr15:4455898 1.45E-52 dispersed
Car15g00618 Car-Chr15:3430886 Car04g02296 Car-Chr4:18440015 7.99E-97 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4816 PF00072 Response_reg 5.50E-18 CL0304 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00618 K14492 - csv:101216267 261.151