Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00659 ATGCATCACCTGCCTCAGTTTTTCTCTCCCAGGAAGCGAAGCAAAGCCATGGATCCGAGGAAAATTGCAGGGAAACCCAAGCTTTACCGACTTAATGCGGCCAAGAACATCGACTATGACGCTGCTTACACGTCTTCTTCGTTCGATGATTCCTCTGGGTCTCTCTACACTCGCTCCATGGAGACCTTCAATCCCTCGAGCTTCCGGATTAAAGGGCTTGACGGTGAAGTTGATCTCATATGTCGGACTTTAGGGCTAGATGGCCCTGACGACTTCGCTATTCCGATGGAGGCTTGGGAGGCCAGGAAGGTTCGTTCATCTTCTGATATTCTACCGAGGTCGAGGCTGTATCCCGTGGATAGTCCAAAGACAGAGGAGATTAGTAAGGAGAAGGAAGATGAAGAAAACGAAGACGAATTGTGCCGGAGGGTTAAGGATTCAGTACGAATTAGCGATGAGATGTCCACGCTGAAGACTGAACTTCCCGAGTTGAATGAACGCTGTATGGATACTGTTACTGGACGTAGCCCGAGAAGTGGAATCAATGGTGCTCGGCCTCCCTTACTCAAGCCGCCGCCGTGTATGCGGCTTCCAGATTTTGATAACGCTTTCTCGACTTGGGACATTTTGAAAGCTTTTGCTCCATTAGAGGATGATAAAAAACAGGATGAAGTAGAAGAACGAGTCGAACCTTTGGTTGAACGAGAAGTCGAGGAAAATATTGTCAGGCCCGAGGAGAGCGCAGCGCTCATAGAGTCCTGGGGTTCCTTCACGACCTCGAATGACGATGATTCTTCGAGCAGTACGACGGAGCCTGCAAATATTTCACCCAATATGAGAGGTAAACCCATTATCACATCCTGGGTGGAAACCGGTAGGCTTCTTGGACGCGGTTCATTTGGATCAGTTTCCGAAGCAATTTCAGAGGATGGAATCTTTTTTGCTCTTAAAGAAGTTTCACTGCTCAATGAAGATAGTCAGGGAAGACAGAGCATCTTTCAACTTCAGCAGGAGATATCTCTTCTAAGTGAATTTGAGCATGAGAACATAGTCCAGTACTACGGCACACATTCGGATGGGTCAAAACTCTATATCTTCCTGGAGCTTGTATCTCAAGGCTCCCTTCTGAATTTATATCAGAGAACAAACCTTCTGGATTCCATTGTTTCTGCCTATACAAGGCAGATTCTGTCTGGTTTAAAGTATCTTCATGAGCGAAATGTGGTTCACAGGGATATTAAATGTGCTAATATATTGGTGGATGTGAATGGATCTGTGAAGCTTGCAGATTTTGGTTTGGCGAAGGCAACAAAATTCAACGACGTTAAATCTTGCAAGGGAACTGCGTTCTGGATGGCACCTGAGGTGGTTAATGGGAAGGGTCAAGGATACGGGCTTCCGGCCGATATTTGGAGCCTTGGGTGTACAGTATTGGAAATGTTAACTCGAAAGCTTCCGTACTCAGAAGTCGAAAGTCCTATGCAGGCACTATTTAGGATTGGAAAAGGCAAAGCGCCTGTAGTTCCCGAGTCTCTCCCAAAAGATGCACAGGATTTCATTTTGCAGTGCCTACAAGTTAATCCACACGACCGTCCTATCGCTGCTGATCTAATAAATCATCCGTTTGTGAAACGACCAGTTTCCAGTTTATCAGTGTCGGCATCTCCTTACAACAAGCCAGGCAGAAGAATTTAA 1695 46.25 MHHLPQFFSPRKRSKAMDPRKIAGKPKLYRLNAAKNIDYDAAYTSSSFDDSSGSLYTRSMETFNPSSFRIKGLDGEVDLICRTLGLDGPDDFAIPMEAWEARKVRSSSDILPRSRLYPVDSPKTEEISKEKEDEENEDELCRRVKDSVRISDEMSTLKTELPELNERCMDTVTGRSPRSGINGARPPLLKPPPCMRLPDFDNAFSTWDILKAFAPLEDDKKQDEVEERVEPLVEREVEENIVRPEESAALIESWGSFTTSNDDDSSSSTTEPANISPNMRGKPIITSWVETGRLLGRGSFGSVSEAISEDGIFFALKEVSLLNEDSQGRQSIFQLQQEISLLSEFEHENIVQYYGTHSDGSKLYIFLELVSQGSLLNLYQRTNLLDSIVSAYTRQILSGLKYLHERNVVHRDIKCANILVDVNGSVKLADFGLAKATKFNDVKSCKGTAFWMAPEVVNGKGQGYGLPADIWSLGCTVLEMLTRKLPYSEVESPMQALFRIGKGKAPVVPESLPKDAQDFILQCLQVNPHDRPIAADLINHPFVKRPVSSLSVSASPYNKPGRRI 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3664044 3669039 - Carg01496-RA Car15g00659 162496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00659 564 MobiDBLite consensus disorder prediction 172 192 - -
Car15g00659 564 MobiDBLite consensus disorder prediction 113 139 - -
Car15g00659 564 MobiDBLite consensus disorder prediction 256 276 - -
Car15g00659 564 PRINTS Tyrosine kinase catalytic domain signature 367 380 IPR001245 GO:0004672|GO:0006468
Car15g00659 564 PRINTS Tyrosine kinase catalytic domain signature 402 420 IPR001245 GO:0004672|GO:0006468
Car15g00659 564 PRINTS Tyrosine kinase catalytic domain signature 468 490 IPR001245 GO:0004672|GO:0006468
Car15g00659 564 PRINTS Tyrosine kinase catalytic domain signature 512 534 IPR001245 GO:0004672|GO:0006468
Car15g00659 564 Gene3D Transferase(Phosphotransferase) domain 1 288 559 - -
Car15g00659 564 SMART serkin_6 289 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00659 564 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
Car15g00659 564 MobiDBLite consensus disorder prediction 119 139 - -
Car15g00659 564 MobiDBLite consensus disorder prediction 256 279 - -
Car15g00659 564 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 178 553 - -
Car15g00659 564 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 24 136 - -
Car15g00659 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Car15g00659 564 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 24 136 - -
Car15g00659 564 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 178 553 - -
Car15g00659 564 SUPERFAMILY Protein kinase-like (PK-like) 263 554 IPR011009 -
Car15g00659 564 Pfam Protein kinase domain 290 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00659 564 ProSiteProfiles Protein kinase domain profile. 289 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02247 Car15g00659 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00659 Car-Chr15:3664044 Car02g00816 Car-Chr2:5902584 1.19E-79 dispersed
Car15g00659 Car-Chr15:3664044 Car04g02247 Car-Chr4:18194981 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89394 PF00069 Pkinase 9.80E-66 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00659 K13414 - csv:101218538 888.641