Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00663 ATGGGCTCGATAGACGTCCAATCAACCAATCCTGAAAATGGATCCGACGCCGCCGTTTCTGGTGATGGTCGTCAAAAGCCAGTTTCCGCCGACGGTATGAACCAGACATCTAACGAACCAGAAGGAACTGCGCCCGAGAAGCCTAAAGAATTGGGGCCGACGAAGAAGCGTTTGTCCTCCATGCTTCCGCTTGATGTCGGCACCCGCGTCATGTGCCGTTGGAGGGACGGGAAGTACCATCCCGTTAAGGTTATTGAACGTCGGAAGTTGCAGGCAACTGGTTTTAGTGATTACGAATACTATGTCCATTACACTGAGTTCAATAGGAGACTTGATGAGTGGGTGAAGCTTGACCAACTTGATCTTGATTCAGTTGAGACGGTTGTTGATGAGAAAGTGGAGGACAAGGTAACAGGATTGAAGATGACCCGACACCAGAAGCGGAAGATTGACGAAACCCATGTTGAGGGCCATGAGGAACTCGATGCTGCCAGCTTGAGGGAGCATGAAGAATTTACAAAAGTGAAAAATATTGCAACAATTGAACTTGGAAGATATGAGATTGAGACATGGTATTTCTCCCCCTTTCCGCCAGAGTACAATGACACCACAAAGCTTTATTTTTGTGAGTTTTGTCTCAATTTCATGAAGCGCAAAGAACAGCTACAGAGACATATGGTGAGATATGCTCCATCCTGTCTTTTGTTGTTTATGAATGAGATTTTAGGCCATACTATCAACTTATATATGGTGATTCATAATAAGGTTTTTGGACCTACTTTGAGGGCATCCGAAAATCATAATAAGAGGAAGTGTGATCTGAAGCATCCACCTGGTGATGAAATATATCGATGTGGCACTTTGTCAATGTTTGAGGTCGACGGAAAGAAGAACAAGGTTTATGGGCAGAATCTCTGTTACTTAGCAAAGTTATTTCTGGACCACAAGACCCTCTACTATGATGTAGACCTTTTTCTGTTTTATGTCCTGTGTGAGTGTGATGATCGAGGGTGTCACATGGTTGGATATTTTTCAAAGGAAAAGCATTCAGAGGAATCCTATAATCTGGCATGCATTCTCACTCTTCCTCCTTATCAAAGGAAGGCTTATGAACTCTCCAAGAAGGAAGGTAAAGTTGGGACTCCTGAAAGACCTCTTTCTGACCTTGGATTGGTGAGCTACAGAGGGTACTGGACCAGAGTTCTTTTAGACATCTTGAAAAAGCACAAGGCCAATATCTCTATCAAGGAGCTAAGTGACATGACAGCTATCAAAGCCGAAGATATTTTGAACACACTTCAGAGCCTGGAGTTGATTCAATACAGGAAAGGACAGCATGTTATATGTGCCGACCCCAAGGTGCTGGATCGTCATCTCAAAGCTGCTGGTCGTGGGGGCCTAGAGGTCGATGTTAGCAAATTGATCTGGACTCCATACAGAGAACAGGGTTGA 1452 44.35 MGSIDVQSTNPENGSDAAVSGDGRQKPVSADGMNQTSNEPEGTAPEKPKELGPTKKRLSSMLPLDVGTRVMCRWRDGKYHPVKVIERRKLQATGFSDYEYYVHYTEFNRRLDEWVKLDQLDLDSVETVVDEKVEDKVTGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDTTKLYFCEFCLNFMKRKEQLQRHMVRYAPSCLLLFMNEILGHTINLYMVIHNKVFGPTLRASENHNKRKCDLKHPPGDEIYRCGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKAYELSKKEGKVGTPERPLSDLGLVSYRGYWTRVLLDILKKHKANISIKELSDMTAIKAEDILNTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYREQG 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3702233 3707889 + Carg01492-RA Car15g00663 162500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00663 483 Pfam MOZ/SAS family 277 445 IPR002717 GO:0004402|GO:0006355|GO:0016573
Car15g00663 483 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 173 478 IPR002717 GO:0004402|GO:0006355|GO:0016573
Car15g00663 483 Pfam MYST family zinc finger domain 175 227 IPR040706 -
Car15g00663 483 Pfam RNA binding activity-knot of a chromodomain 64 122 IPR025995 -
Car15g00663 483 MobiDBLite consensus disorder prediction 1 16 - -
Car15g00663 483 MobiDBLite consensus disorder prediction 1 60 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02241 Car15g00663 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00663 Car-Chr15:3702233 Car04g02241 Car-Chr4:18140975 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00663 K11308 - csv:101217824 838.18