Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00671 ATGATGGATTGTGCATATGGGACAACCCCATCAGGTCCTACCATTTTAGGATGGACTCAGTTTCTTGGGAAGGAGGATTTTAGGCATATTCCCAAGGAAATGTTCTATTACTACAATAATACATACTATTTCTATTCAAATTTTGGTATACTGCTAGGCATTGGCATGTCTGAGCTTTGTCGTAGAGTTCTATTTTCTCAAGTGCACTGTTTCTCGAAACCGATTGAATGTTTGTTATCCATGGACTCAAGGGGCCATTCCAATGGTGGAGAACTTGAAACAAAAGAGATGGACATTAGAGACCTTTCATCTTCGCGCAACAATACTCAGTATATTCACAAGGTGGGGGTTCCACCGAAGCAAGGTTTCTTCAACGAATTTAAAGCACGAGTGAAGGAGACTTTCTTTGCAGATGAGCCTCTGCGAACCTTCAAGGATCAATCGAAGTCCCGAAAGTTGGTCCTGGGAATTCAGGCTATCTTCCCGATAATTGAATGGGGGAGGAATTACAATCTGACAAAATTAAGAGGAGATATAATTGCTGGACTCACTATTGCAAGTCTCTGTATTCCACAGGATATAGGGTATGCAAAACTTGCTAATTTGGCTCCCCAGTATGGTTTATACTCCAGCTTTGTACCACCACTGGTTTATGCTTTGATGGGTAGCTCTAGAGACATAGCGATTGGACCAGTGGCTGTTGTTTCTCTCTTGCTGGGAACAATGCTACAAAAGGAGATTGATTACCATACACATCCAGAAGCGTATCTGCGGCTTGCATTTACAGCTACGTTTTTTGCTGGGATCACCCAAGCCACTCTAGGGATGCTAAGGTTGGGTTTTCTGATTGACTTTCTATCTCATGCTGCCATTGTTGGTTTTATGGGTGGAGCTGCCATCACTATTGCCCTTCAACAACTTAAAGGCTTTCTTGGTATTAAAAATTTTACAAAGAAAACAGACATCATCTCTGTTATGCGCTCAGTATTTGAGGCAGCGCATCATGGATGGAACTGGCAGACGATAGTCATTGGAGTAGCTTTTCTAAGTTTTCTTCTATTAGCCAAGTATATTGGAAAGAAGAACAAGAGCCTTTTTTGGGTGCCTGCAATTGCTCCATTGATATCAGTCATTCTGTCCACCTTTTTTGTTTACATTACCCATGCAGACCAGAAAGGTGTCGCAATTGTGAAACACATAGAGAAAGGAATCAATCCCTCATCAGTGAAGCAGATCTACTTCACTGGTGAGTACCTCCTTAAAGGGTTCAGGATTGGCGCTGTGGCCGGTATGATAGCATTAACGGAAGCCATAGCAATTGGAAGAACATTTGCTTCCATGAAGGATTACCAGCTTGATGGTAACAAAGAAATGGTGGCACTAGGAACAATGAACGTTATTGGTTCACTGACTTCCTGCTATGTGGCAACAGGCTCGTTCTCTCGCTCAGCTGTGAATTACATGTCTGGCTGCCAAACTGCAGTCTCAAACATTGTTATGTCCTGTGTTGTATTTCTAACTCTAGAGTTCATCACTCCCCTTTTCAAGTACACTCCGAATGCTATTCTAGCTGCCATCATTATCACTGCTGTGATCAACTTAATTGACATTCAGGCAGCAATTTTGCTTTGGAAGATAGATAAATTTGATTTTGTTGCTTGTTTGGGAGCCTTCTTTGGTGTGATATTTGCAAATGTTGAGACAGGCCTCCTAATTGCTGTCTCTATATCATTTGCTAAGATACTCTTACAAGTAACCAGGCCAAGGGTTGCCATTCTTGGAAAGATCCCTAGGACCACAGTATACAGGAACACCCAACAGTATCCAGAAGCAACAAGGGTTCCGGGCATTCTCATTGTGAGAGTCGATTCTGCAATTTACTTTTCTAACTCCAATTACATCAAAGAGAGGATATTGAGATGGTTGGCAGATGAGGAAGAGCAAATAAAGAAGGCTTATTCAACAAAAACTCAGTTTTTGATTGTTGAGATGTCTCCTGTTACCGACATTGACACTAGTGGAATTCATGCCCTGGAAGAGCTATACAGGAATCTCCAGAAAAGAGACATTCAGCTTGTTTTGGCAAACCCCGGGCCTGTAGTGATTGATAAACTCCATGCATCCGATCTTGCTAATCTGATTGGCGAGGACCATATCTTTCTAACAGTTGCTGAAGCTGTTTCGTCCTGCTCCCCAAAATTGGTGGAAGGGGTCTAA 2217 42.22 MMDCAYGTTPSGPTILGWTQFLGKEDFRHIPKEMFYYYNNTYYFYSNFGILLGIGMSELCRRVLFSQVHCFSKPIECLLSMDSRGHSNGGELETKEMDIRDLSSSRNNTQYIHKVGVPPKQGFFNEFKARVKETFFADEPLRTFKDQSKSRKLVLGIQAIFPIIEWGRNYNLTKLRGDIIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLVYALMGSSRDIAIGPVAVVSLLLGTMLQKEIDYHTHPEAYLRLAFTATFFAGITQATLGMLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKNFTKKTDIISVMRSVFEAAHHGWNWQTIVIGVAFLSFLLLAKYIGKKNKSLFWVPAIAPLISVILSTFFVYITHADQKGVAIVKHIEKGINPSSVKQIYFTGEYLLKGFRIGAVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGTMNVIGSLTSCYVATGSFSRSAVNYMSGCQTAVSNIVMSCVVFLTLEFITPLFKYTPNAILAAIIITAVINLIDIQAAILLWKIDKFDFVACLGAFFGVIFANVETGLLIAVSISFAKILLQVTRPRVAILGKIPRTTVYRNTQQYPEATRVPGILIVRVDSAIYFSNSNYIKERILRWLADEEEQIKKAYSTKTQFLIVEMSPVTDIDTSGIHALEELYRNLQKRDIQLVLANPGPVVIDKLHASDLANLIGEDHIFLTVAEAVSSCSPKLVEGV 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3743521 3748891 - Carg01484-RA Car15g00671 162508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00671 738 Pfam STAS domain 608 726 IPR002645 -
Car15g00671 738 ProSiteProfiles STAS domain profile. 607 730 IPR002645 -
Car15g00671 738 ProSitePatterns SLC26A transporters signature. 204 225 IPR018045 GO:0008271|GO:0008272
Car15g00671 738 Pfam Sulfate permease family 175 555 IPR011547 GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02515 Car-Chr4:19934705 Car15g00671 Car-Chr15:3743521 4.68E-123 dispersed
Car14g01569 Car-Chr14:12815470 Car15g00671 Car-Chr15:3743521 0 dispersed
Car15g00671 Car-Chr15:3743521 Car17g01133 Car-Chr17:8699382 0 dispersed
Car16g00707 Car-Chr16:4503735 Car15g00671 Car-Chr15:3743521 3.15E-137 transposed
Car19g00217 Car-Chr19:2118407 Car15g00671 Car-Chr15:3743521 0 transposed
Car15g00671 Car-Chr15:3743521 Car04g01189 Car-Chr4:6832847 0 wgd
Car15g00671 Car-Chr15:3743521 Car04g02235 Car-Chr4:18102058 1.47E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00671 K17470 - csv:101212138 1192.18