Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car15g00679 | AAAAAGAAAAAGAAAAAGAAAAAATCTCTTTCTTGTTCTCTTTCCCACTGTTGCCATATTCGTGAAGATCTCCGTGAAAATCCGAACTGCGCTGTGTCATCGTTCAAACCGTTTCTCTCATTTTCCTCGCGATTCCATCTGTACGCACAATCAAAAGTTTCAAGCGGCAGATTCTGCACGGAAGTAGAAGAAGGTGCGGTTCTGGTGAAGAGAGGAGGACGGAAGGCGGAAGGCGGAAGGCGGTGGATGGATTCGAATGAGGAGGAATATAATGTGGAAACCGTTCGCGAACGGATCGCGTCGTCGCGAGCGAGCCGACTGGACCTGGTTCAGAAAGAGTTGAGTATGCAATCGGGTCGCAGAAGATTTAGCCTCGAAAATATCATCAATGGCATTAAAGGCCTCATTATCCATCCTGACAGCAGGTGGTATCGGGCGTGGACGAAGTTCATACTGATATGGGCAGTGTATTCTTCCTTCTTCACACCCATGGAATTCGCGTTCTTCAGGGGATTACCAGATAATCTATTTATACTTGACATTGTTGGACAGATTGCTTTCCTCGTTGACATTGTTTTCCAGTTCTTCCTTGCGTACAGAGATAGTCAGACATACCTAATGGTCTATAAGCACACTCCAATAGCACTCAAGTACTTGAAGTCCACTTTTGTGACTGATTTTCTCAGCTGTATGCCCTGGGACCTCATTTATAAGGCTTGTGGGAAGAGAGAGGAGGTGAGATGCCTTCTATGGATAAGGCTATTTCGGGTGCGGAAAGTCACCGATTTTTTCCAGAGGATGGAGAAGGATATACGTATTAATTATATGTTTACTAGAATTGTGAAGCTCATTGTTGTTGAACTTTACTGCACACATACTGCGGCCTGCATCTTTTACTATTTGGCAACCACTCTTCCTCCTGCCGAAGAAGGGTACACATGGATCGGAAGCTTAAAATTGGGGGACTACAGTTACTCACATTTCAGGGATATTGATCTATGGAAACGATACACCACATCTTTATACTTTGCTATTGTCACCATGGCCACTGTTGGTTATGGTGATATACATGCAGTCAACCTGAGGGAAATGATATTCGTTATGATTTATGTATCATTTGACATGGTTCTCGGTGCTTACTTGATTGGTAACATGACTGCGTTGATTGTAAAAGGGTCCAAGACGGTGAAATTCAGGGATAAAATGACAGATATAATGAAATACATGAACAGAAATAGACTTAGCAGGGACATCCGTGATCAGATCAAAGGTCACTTACGTTTACAGTATGAAAGTAGCTATACTGAAGCTTCTGTTCTACAGGACATCCCAATATCGATCCGTGCTAAGAATGTCGCTATCTTTAAAGGATGCTCTCCAGAGTTTATCAACCAAATAGTTATTAGACTGCATGAAGAGTTCTTTCTGCCTGGAGAGGTGATAATGGAACCAGGAAATGTGGTCGATCAACTTTATTTTGTCTCTCATGGTGTGCTGGAGGAAGTGGGCATAGCACAAGATGGTTCAGAAGAAACCATAGATTTACTAGAACCCAACAGCTCTTTTGGAGAGATTTCAATTCTTTGCAATATTCCTCAACCCTATACAGTTCGAGTGTGTGAATTATGTAGACTACTACGCCTTGACAAGCAGTCCTTCACAAATATCCTTGACATATACTTCTACGACGGCAGGAAAATCTTGAACAATCTTCTTGAGGGAAGAGAAACGAGCCTCCGAATTAAGCAAATGGAATCAGATATCACATTTCATATTGGTAAGCAAGAAGCTGAACTTGCTCTGAAGGTGAACAGTGCCGCATATCATGGAGATCTGTACCAATTGAAAGGTCTGGTTCGAGCTGGAGCTGATCCAAACAAGACAGATTATGATGGAAGGTCACCTTTGATGATATCGAAGAACTTAGTTGTTTTTCCACAGCATCTTGCAGCATCCAGAGGATTCGATGATATGGTAGTTTTCCTAATTCAGGAAGGAGTAGACATTGATCTTACAGATAATTTTGGCAATACGCCATTGATGGAAGCCATCAAGAATGGGAACGATCATGTTGCTGAGTTGCTTTCTAAAGAAGGTGCTTCATTGAAGGTTGAGAATGCTGGTAGCTTCCTCTGTGCAGCAGTTTCAAGGGGTGATGCAGATCTTATTAAGAGATTATTGCTCTATGGCATTGACCCCAACACCAAAGATTACGATTTCAGAACTCCGCTACATATAGCTGCCTCTTCTGGGCTAACTTTGATGGCAAAGTTGCTTTTAGAATATGGGGGTAGGGCAAAAGATTCTCAGTTATTAGAATCCTCTTATTCCTCTAAAAAATTCTCAGACAGAAAATACTCGAAGAAATGTACAGTGTTCCCCTTCCACCCATGGGATCCTGAAGAAAATAGAAAGCCTGGAATCGTCCTATGGGTTCCATACACCATTGAAGAGCTCATCAAAGTATCATCAGATCAGCTTCTAGTTTCAGGTGAATGTTGTCTATTATCAGAAGACGGAGGTAAAATTCTTGATATCCATATGGTTGATGAAGGTCAAAAGCTGTATCTAGTTCCTGAAACT | 2583 | 41.97 | KKKKKKKKSLSCSLSHCCHIREDLRENPNCAVSSFKPFLSFSSRFHLYAQSKVSSGRFCTEVEEGAVLVKRGGRKAEGGRRWMDSNEEEYNVETVRERIASSRASRLDLVQKELSMQSGRRRFSLENIINGIKGLIIHPDSRWYRAWTKFILIWAVYSSFFTPMEFAFFRGLPDNLFILDIVGQIAFLVDIVFQFFLAYRDSQTYLMVYKHTPIALKYLKSTFVTDFLSCMPWDLIYKACGKREEVRCLLWIRLFRVRKVTDFFQRMEKDIRINYMFTRIVKLIVVELYCTHTAACIFYYLATTLPPAEEGYTWIGSLKLGDYSYSHFRDIDLWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFVMIYVSFDMVLGAYLIGNMTALIVKGSKTVKFRDKMTDIMKYMNRNRLSRDIRDQIKGHLRLQYESSYTEASVLQDIPISIRAKNVAIFKGCSPEFINQIVIRLHEEFFLPGEVIMEPGNVVDQLYFVSHGVLEEVGIAQDGSEETIDLLEPNSSFGEISILCNIPQPYTVRVCELCRLLRLDKQSFTNILDIYFYDGRKILNNLLEGRETSLRIKQMESDITFHIGKQEAELALKVNSAAYHGDLYQLKGLVRAGADPNKTDYDGRSPLMISKNLVVFPQHLAASRGFDDMVVFLIQEGVDIDLTDNFGNTPLMEAIKNGNDHVAELLSKEGASLKVENAGSFLCAAVSRGDADLIKRLLLYGIDPNTKDYDFRTPLHIAASSGLTLMAKLLLEYGGRAKDSQLLESSYSSKKFSDRKYSKKCTVFPFHPWDPEENRKPGIVLWVPYTIEELIKVSSDQLLVSGECCLLSEDGGKILDIHMVDEGQKLYLVPET | 861 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 3778794 | 3785265 | - | Carg01476-RA | Car15g00679 | 162516 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car15g00679 | 861 | Pfam | Cyclic nucleotide-binding domain | 474 | 558 | IPR000595 | - | |
Car15g00679 | 861 | ProSiteProfiles | Ankyrin repeat profile. | 706 | 738 | IPR002110 | GO:0005515 | |
Car15g00679 | 861 | Pfam | Ion transport protein | 145 | 390 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Car15g00679 | 861 | Pfam | KHA, dimerisation domain of potassium ion channel | 788 | 857 | IPR021789 | - | |
Car15g00679 | 861 | ProSiteProfiles | Ankyrin repeat profile. | 675 | 707 | IPR002110 | GO:0005515 | |
Car15g00679 | 861 | Pfam | Ankyrin repeats (3 copies) | 606 | 704 | IPR002110 | GO:0005515 | |
Car15g00679 | 861 | ProSiteProfiles | Ankyrin repeat region circular profile. | 739 | 763 | - | - | |
Car15g00679 | 861 | ProSiteProfiles | Ankyrin repeat region circular profile. | 646 | 674 | - | - | |
Car15g00679 | 861 | Pfam | Ankyrin repeats (many copies) | 711 | 759 | IPR002110 | GO:0005515 | |
Car15g00679 | 861 | ProSiteProfiles | Ankyrin repeat profile. | 646 | 674 | IPR002110 | GO:0005515 | |
Car15g00679 | 861 | ProSiteProfiles | Ankyrin repeat profile. | 739 | 763 | IPR002110 | GO:0005515 | |
Car15g00679 | 861 | ProSiteProfiles | KHA domain profile. | 789 | 861 | IPR021789 | - | |
Car15g00679 | 861 | ProSiteProfiles | Ankyrin repeat region circular profile. | 675 | 706 | - | - | |
Car15g00679 | 861 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 454 | 574 | IPR000595 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car06g00769 | Car-Chr6:5866479 | Car15g00679 | Car-Chr15:3778794 | 2.80E-07 | dispersed | |
Car15g00679 | Car-Chr15:3778794 | Car11g00432 | Car-Chr11:2414856 | 5.69E-111 | dispersed | |
Car15g00679 | Car-Chr15:3778794 | Car04g02227 | Car-Chr4:18066473 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car15g00679 | K21867 | - | csv:101210912 | 1328.54 |