Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00708 ATGGAGCGCCGGAATCCGCTCCGGCTTTGGTTTACGTCAGCGGTTTTTGTTGTTTTGATGCTCTTTCCTGTAGGAGAGGCGGATATTGCGTCGGACACGGCGGCGCTGGTGGTGCTTCAGAAAGCTATGGGCGTTCTGAGTCGGACTCGCCGTTGGAACCTTTCCGATGAGACTCCCTGTTTGTGGCTTGGTGTCACTTGCCGCGGCGGGAGGGTTGCTGAACTGCGGCTTCCTGGCGTTGGACTCGTCGGGCAACTTCCTTTAGGGCTTGGAAATTTGACTCAACTTGAAACCCTATCTCTTCGCTCTAACTTGCTTTCAGGTTCTATCCCATCTGATTTTGCAAACCTCCGCTCCCTCCGGAATCTATACTTGCATCGGAACTTGTTTTCCGGCGAGATTCCTCCGGTTCTGTTCAGTATTAAGAGTCTTGTTCGCCTGAATTTGGCGCACAACAAGTTCGTCGGTTCGATTCCTTCTGGATTCGATAATCTCACGAACTTGAAGGTTCTCAACTTGGAAGAGAATCAACTCGATGGATTCATTCCTGATTTCAACCTTCCCTCGCTCAAGGCTCTCAATGTTTCTTTCAATGGTCTCAACGGCTCAATCCCTACGCAGTTTTCCGATCAACCAGCCAGCGCCTTCGATGGCAACTCTCTCTGCGGGAAGCCACTGAGCCCTTGCGACGGCGAGGAGAAGAAATTATCCACAGGAGCAATCATCGGAATAGTTATCGGAAGTTTGGTTGCATTCTTGATTATAGTTCTGATTTTAATCTTTCTGTACCGAAAGACGAACAGGACTAATCGGTCAGCTGGTGCTCAGACGACGACCTCCGAGAGATTGTCGTCGGAGGTCGATAATGCCGGCGGCGGAAGCGGAGGAATTGGGAGTGAGAGGAATTTGGTGTTCTGTGGGAATGGAGAAAGAACGTTTGATTTGGAGGAACTGTTGAAAGCTTCAGCAGAGGTGCTGGGGAAGGGTTCTTTTGGATCAACTTACAAGGCAGCTCTGGATGTAGGGATGACTGTGGCGGTTAAGAGGTTGAGAGATGTCAAAGTTTCAGAGAAGGAATTCAAGGAGAAGATTGAAAGCTTGGGGATGATGAACCATCAGAACTTGGTTTCCATTAATGGTTACTACTATGGCGGAGATGAGAAGCTGCTGCTGTGTGATTATGTCTCCATCGGAAGCTTATCTGTGCATTTACATGGCAACAAAAGTCCGGGCAGGACTCCATTGAAATGGGAAGCAAGGGCAGGCATTGCGCTCGCAGCCGCTCGGGGGATAACATATCTACATTCTCGACGACCTCCGACCTCCCATGGCAATATAAAGCCTTCAAACATTCTCCTCAATCGATCCCGGACGGCTTGTGTTTCCGACTTCGGCCTCATTCAGATTGCAAGTCCTACATCCACTCCAAACCATATTGCAACCTACCGTGCCCCTGAGGTCACCGATCCTCGAAAAGTATCCTTAAAAGCAGATGTTTACAGTTTCGGTGTAGTAATTCTAGAGCTTCTAACAGGGAAGGCTCCGAACTCGCCAATGCTCAATGACGATGGCATAGACCTCCCACGATGGGTGCACTCGAAGATCGAAGAGAAGAAAACGGCCGAAGTGTTCGATGAGGAGCTGTTAGAATACAAGAATGGCTTGGATGAAATGGTTCAACTTCTACATCTTGCCATGTTGTGTACAGCACCACACCCGGATAGTCGTCCATCAATGGCGAAGGTGGCGAGTCGAATCGATGAAATATATCATTCGATCTTACTGAAAGAACAAGACACGAGCAACGATAAGTTTTATGACGTGGATAGTACTGTTTCTCAGCAATTTTACTCGGCTGATTCCATCATAGTTCCACCTTCAATCTAG 1887 48.6 MERRNPLRLWFTSAVFVVLMLFPVGEADIASDTAALVVLQKAMGVLSRTRRWNLSDETPCLWLGVTCRGGRVAELRLPGVGLVGQLPLGLGNLTQLETLSLRSNLLSGSIPSDFANLRSLRNLYLHRNLFSGEIPPVLFSIKSLVRLNLAHNKFVGSIPSGFDNLTNLKVLNLEENQLDGFIPDFNLPSLKALNVSFNGLNGSIPTQFSDQPASAFDGNSLCGKPLSPCDGEEKKLSTGAIIGIVIGSLVAFLIIVLILIFLYRKTNRTNRSAGAQTTTSERLSSEVDNAGGGSGGIGSERNLVFCGNGERTFDLEELLKASAEVLGKGSFGSTYKAALDVGMTVAVKRLRDVKVSEKEFKEKIESLGMMNHQNLVSINGYYYGGDEKLLLCDYVSIGSLSVHLHGNKSPGRTPLKWEARAGIALAAARGITYLHSRRPPTSHGNIKPSNILLNRSRTACVSDFGLIQIASPTSTPNHIATYRAPEVTDPRKVSLKADVYSFGVVILELLTGKAPNSPMLNDDGIDLPRWVHSKIEEKKTAEVFDEELLEYKNGLDEMVQLLHLAMLCTAPHPDSRPSMAKVASRIDEIYHSILLKEQDTSNDKFYDVDSTVSQQFYSADSIIVPPSI 628
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 3936395 3939246 - Carg01447-RA Car15g00708 162545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00708 628 ProSitePatterns Protein kinases ATP-binding region signature. 326 348 IPR017441 GO:0005524
Car15g00708 628 MobiDBLite consensus disorder prediction 271 295 - -
Car15g00708 628 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Car15g00708 628 MobiDBLite consensus disorder prediction 271 287 - -
Car15g00708 628 Pfam Leucine rich repeat 143 200 IPR001611 GO:0005515
Car15g00708 628 ProSiteProfiles Protein kinase domain profile. 320 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00708 628 Pfam Protein tyrosine and serine/threonine kinase 324 585 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g00761 Car-Chr14:4332047 Car15g00708 Car-Chr15:3936395 0 dispersed
Car15g00708 Car-Chr15:3936395 Car18g00071 Car-Chr18:369067 0 dispersed
Car15g00708 Car-Chr15:3936395 Car04g02199 Car-Chr4:17892052 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89397 PF07714 PK_Tyr_Ser-Thr 4.50E-34 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00708 - - mcha:111012024 959.133