Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00735 ATGAGTGAGACGATGGAGAATTACTTGAGAAAGAACTTCGAGCTCGAGCCGAAGAGTCCGTCCGAGGAGGCTCAAATGCGATGGCGATCCGCCGTCTCTATTGTCAAGAATCGCCGCCGGAGGTTTCGCATGGTTGCTGATCTCGATAAGCGAGCTCAGGCTGAGGAAAAGCGCAGGAAACTCCAGGAAAAGATACGAGTAGCTCTATACGTACAAAAAGCAGCATTGCATTTCATTGATGCCGGGAAGCAAGGTGAATACAAGCTCTCCACAGAAGTAAGGGAAGCTGGTTTTGGAGTTGAACCTGATGTATTGGCATCCATGGTTCAAATCCACAATACCAAGAGTTTGTTACATTTCGGGGGCATTGGGGGATTGGCAAGAGAATTAAATGTTTCTCTGAAAGATGGAATTGCTACAAGTGAAGTAAGTTCAAGGCAGAGCACATACGGGATCAACCGTTACGTTGAGAAACCTTCAAGAGGGTTTTGGACGTTTGTGTGGGAAGCCCTGCATGATTTGACTCTCGTCATTCTCTTGGTTTCTGCCGTTGTTTCCATTGGCGTTGGAAATGCAACTGAAGGTTGGCCTAAAGGCATGTACGATGGACTTGGAATAATATTGAGTATCTTTCTCGTCGTGATAGTAACCGCAGTCAGTGACTATAATCAGTCCTTGCAATTTAAGGACTTGGAAAAACAGAAGAAAAATATTATTATTCAAGTTACTAGAGATGGATGCAGACAGAAGGTTTCTATTTATGATTTGGTGGTTGGAGATATTGTTCATTTATCTATTGGAGATCAAGTTCCTGCTGATGGCATTTTGGTGTCAGGCTACAGCTTATCAATAGACGAATCAAGCTTGTCAGGTGAAAGTGAACCTGTAAATGTAGATGATAATAGGCCTTTCCTTCTAGCAGGGACGAAAGTTCAGGACGGGTCTGGTAAGATGCTAGTAGCCTCTGTTGGTATGAGAACTGAATGGGGAAGATTGATGGTCACTTTGAGTGAAGGAGGAGATGACGAAACGCCACTTCAGGTAAAGCTTAACGGGGTTGCGACAATTATTGGAAAGGTCGGCTTGGTTTTTGCGGTCTTAACGTTTATAGTTCTGATCTCAAGATTTATTGTGCATAAAACATTACATAATGAGATTGGGCACTGGACATCCAAAGATGCATCGACGCTTCTGAATTACTTCGCCATTGCTGTAATTATAATTGTTGTTGCAGTTCCAGAAGGATTGCCTCTAGCCGTGACACTAAGTCTTGCCTTTGCCATGAAAAGGTTGATGAGGGATAAGGCACTTGTGAGGCATCTCTCCGCGTGTGAAACTATGGGTTCTGCAACCTGCATTTGCACCGATAAAACAGGTACATTAACAACGAACCATATGGTCGTCGACAAAATGTGGATTTGTGATGAAACGAGGACAATAAAAAATTCCAATGACGAAATTGCATTGAAATCCTCCGTAAATCAAACAGTATACAAGCTCCTTATACAATCTATTATTTCAAAATACCAGCTCCGAGGTAGTCAAAGGCAAAGATGGGAGGAACACCATTTTAGGTACTCCAACTGA 1587 42.97 MSETMENYLRKNFELEPKSPSEEAQMRWRSAVSIVKNRRRRFRMVADLDKRAQAEEKRRKLQEKIRVALYVQKAALHFIDAGKQGEYKLSTEVREAGFGVEPDVLASMVQIHNTKSLLHFGGIGGLARELNVSLKDGIATSEVSSRQSTYGINRYVEKPSRGFWTFVWEALHDLTLVILLVSAVVSIGVGNATEGWPKGMYDGLGIILSIFLVVIVTAVSDYNQSLQFKDLEKQKKNIIIQVTRDGCRQKVSIYDLVVGDIVHLSIGDQVPADGILVSGYSLSIDESSLSGESEPVNVDDNRPFLLAGTKVQDGSGKMLVASVGMRTEWGRLMVTLSEGGDDETPLQVKLNGVATIIGKVGLVFAVLTFIVLISRFIVHKTLHNEIGHWTSKDASTLLNYFAIAVIIIVVAVPEGLPLAVTLSLAFAMKRLMRDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVDKMWICDETRTIKNSNDEIALKSSVNQTVYKLLIQSIISKYQLRGSQRQRWEEHHFRYSN 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4100980 4107095 - Carg01420-RA Car15g00735 162572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00735 528 Pfam E1-E2 ATPase 240 433 - -
Car15g00735 528 Coils Coil 44 64 - -
Car15g00735 528 Pfam Cation transporter/ATPase, N-terminus 120 186 IPR004014 -
Car15g00735 528 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Car15g00735 528 Pfam Ca2+-ATPase N terminal autoinhibitory domain 10 52 IPR024750 GO:0005516
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car12g00873 Car-Chr12:8608357 Car15g00735 Car-Chr15:4100980 2.30E-129 dispersed
Car15g00735 Car-Chr15:4100980 Car08g00287 Car-Chr8:1816955 4.22E-102 dispersed
Car15g00735 Car-Chr15:4100980 Car01g01394 Car-Chr1:12157382 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00735 K01537 - csv:101203529 902.508