Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00738 ATGTCTGGTTCTGACGGCGTCAACTGCAACAATGGCGCCATTATTGATCATTCTCAGACTAACAACAATGGCGGTTTGGCCGTCAAAAAACCTCCGTCCAAGGACCGTCACAGCAAGGTCGACGGCCGTGGCCGCCGTATTCGTATGCCGATCATTTGTGCTGCTCGGGTTTTCCAACTTACCCGCGAGTTGGGCCACAAATCCGACGGTCAAACCATCGAGTGGCTTCTCCGTCAAGCGGAGCCTTCGATTATTGCTGCCACTGGCACCGGCACTACTCCGGCTAGCTTCTCCACCATTTCGGCTTCACTACGCGGTGGTTCTGCTGCTACTTCCTCTCTTGACCATAAGCCGCTTTTGGCTCCGGCGCCGTTCATTCTTGGCAAGCGCGTTAGAACGGACGACGATGGAGATAATAAAGACGACGGTAGCGGTGGCGGTGGCGGTGGTGGTGGCGTTTCGGTTGGCTCTACTGTGAGTTCGTTTATGAGTACGGCTGCCGCGGGTGGATATTGGGCGATTCCTACGAGGCCGGATTTCGGACAGGTGTGGAGCTTTGCAGCAGCAGCGGCGGCGGCTCCGGAGATGGTGATTCAACCAACCGCGGTTTCTCACCCGGCGTCGTTGTTCGTTCAACAGCAATCGATGGGAGAAGCGTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGGCATCTGAATTTGCTTGCTTCTTTATCCGGTGGACCGGGAAGTTCCGGCCGAAGAGACAACGACCACCGTTGA 762 56.3 MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPLLAPAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4134034 4134795 + Carg01417-RA Car15g00738 162575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00738 253 MobiDBLite consensus disorder prediction 130 152 - -
Car15g00738 253 MobiDBLite consensus disorder prediction 30 45 - -
Car15g00738 253 MobiDBLite consensus disorder prediction 1 27 - -
Car15g00738 253 Pfam TCP family transcription factor 33 119 IPR017887 -
Car15g00738 253 ProSiteProfiles TCP domain profile. 33 87 IPR017887 -
Car15g00738 253 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00738 Car-Chr15:4134034 Car18g00741 Car-Chr18:8490719 7.70E-84 dispersed
Car15g00738 Car-Chr15:4134034 Car04g02171 Car-Chr4:17624847 2.37E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4833 PF03634 TCP 2.60E-32 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00738 K16221 - csv:101214586 349.747