Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car15g00738 | ATGTCTGGTTCTGACGGCGTCAACTGCAACAATGGCGCCATTATTGATCATTCTCAGACTAACAACAATGGCGGTTTGGCCGTCAAAAAACCTCCGTCCAAGGACCGTCACAGCAAGGTCGACGGCCGTGGCCGCCGTATTCGTATGCCGATCATTTGTGCTGCTCGGGTTTTCCAACTTACCCGCGAGTTGGGCCACAAATCCGACGGTCAAACCATCGAGTGGCTTCTCCGTCAAGCGGAGCCTTCGATTATTGCTGCCACTGGCACCGGCACTACTCCGGCTAGCTTCTCCACCATTTCGGCTTCACTACGCGGTGGTTCTGCTGCTACTTCCTCTCTTGACCATAAGCCGCTTTTGGCTCCGGCGCCGTTCATTCTTGGCAAGCGCGTTAGAACGGACGACGATGGAGATAATAAAGACGACGGTAGCGGTGGCGGTGGCGGTGGTGGTGGCGTTTCGGTTGGCTCTACTGTGAGTTCGTTTATGAGTACGGCTGCCGCGGGTGGATATTGGGCGATTCCTACGAGGCCGGATTTCGGACAGGTGTGGAGCTTTGCAGCAGCAGCGGCGGCGGCTCCGGAGATGGTGATTCAACCAACCGCGGTTTCTCACCCGGCGTCGTTGTTCGTTCAACAGCAATCGATGGGAGAAGCGTCGGCGGCGAAAGTGGGAAATTACCTTCCAGGGCATCTGAATTTGCTTGCTTCTTTATCCGGTGGACCGGGAAGTTCCGGCCGAAGAGACAACGACCACCGTTGA | 762 | 56.3 | MSGSDGVNCNNGAIIDHSQTNNNGGLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTISASLRGGSAATSSLDHKPLLAPAPFILGKRVRTDDDGDNKDDGSGGGGGGGGVSVGSTVSSFMSTAAAGGYWAIPTRPDFGQVWSFAAAAAAAPEMVIQPTAVSHPASLFVQQQSMGEASAAKVGNYLPGHLNLLASLSGGPGSSGRRDNDHR | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
15 | 4134034 | 4134795 | + | Carg01417-RA | Car15g00738 | 162575 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car15g00738 | 253 | MobiDBLite | consensus disorder prediction | 130 | 152 | - | - | |
Car15g00738 | 253 | MobiDBLite | consensus disorder prediction | 30 | 45 | - | - | |
Car15g00738 | 253 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Car15g00738 | 253 | Pfam | TCP family transcription factor | 33 | 119 | IPR017887 | - | |
Car15g00738 | 253 | ProSiteProfiles | TCP domain profile. | 33 | 87 | IPR017887 | - | |
Car15g00738 | 253 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car15g00738 | Car-Chr15:4134034 | Car18g00741 | Car-Chr18:8490719 | 7.70E-84 | dispersed | |
Car15g00738 | Car-Chr15:4134034 | Car04g02171 | Car-Chr4:17624847 | 2.37E-135 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4833 | PF03634 | TCP | 2.60E-32 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car15g00738 | K16221 | - | csv:101214586 | 349.747 |