Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00758 ATGTCTTCTTCTTCTCTTTCATGGTTCTTGTTACTTTCCCTTTCGTTTACTTTTTCTGGTACTAGCGGCTCGGTTTCCTATGATGCAATGTCGCTCCTCAGGTTTAAGGGCTCTATTTCGCTAGACGGCTCTGATGTTCTTCGTGGTTGGAATTTGTCGGTTTCTCACTGCGATTGGTTTGGAGTTACTTGCGATGGTGTTACTGGTAGAGTTGTTGGGCTGAATATCAGTGGAAGTGGTGGTGTTATGGCGGCGGATTCTGTTCTGGCTGGGACGTTGAATCCGGCGATTGGAAATCTTACTGAGCTTCGTGTTCTTTCGCTTGTGAATAATCTGATGTACGGGGAGATTCCGAGGAGTGTTGGTAAGCTTCAGTCGTTGGAGATTCTAGAGCTTCAGGGGAACAATTTTTCTGGAGAGATTCCGAAACAGATTAGGTCACTTCGATCTCTTCGCCTGCTTAATTTGTCTGATAACTCGTTTTCTGGCTCGATTCCGAGTAAATTGATAGGTTCAACGAAATTAGAAGCAATTGATTTATCGTACAATCAGTTATCTGGTAGTATTCAAGTTGTTGGTAATAGGTGTGGTGTTTTGAATCATTTGAGGCTTTCGCATAACTTTCTGACCGATAACATTCCGGCGGAGATTGGACAATGTCGGAAACTCAGGACTCTGTTGCTCGATGGCAATATATTAGAGGGACAAATTCCGGCTGAGATCGGCCAAATATCAGAACTCAGAATTCTTGATATATCTAGGAATAGCCTCACCGATTCGATTCCAAAAGAGCTCGGTAATTGCCGGAAGTTGTCACAGATCGTGTTGACGAATTTGAACGACACCAATCCCGACTACGATAGTTTAAGCGGCGAATTCAACGCTTTCAATGGAGGAATTCCTTCCGAGTTGTTATTGCTTCCCAGTCTACAAGTTTTTTGGGCGCCGAGAGGTAATTTTAATGGAAAATTGCCGAATAATTGGAGTTCTTCATGCTCGCTTAGGGTTCTAAATTTAGGGCAAAATTACATCACTGGAACCATACCCGAATCGATTGGGAACTGTGCGAATCTTACCTACCTGGATTTATCCTCAAACAAGCTACAAGGTAACCTCCCTGTGCAGCTTCGAGTTTCCTGTATGGCGTATTTTAATGTAAGCCAGAACAAAATTTCTGGTGTTCTTCCCAGATTTGAGAAAGATAGTTTCCGTATGAACATGATTCCGCATGAACCAGCTTCCAGATTCTTAGATGATGAAGATAATTGGAACTCTTACATCAATTCTCCTGTCTGGGATTTCCCAAGATTAAATGATAATCTCATAATCGCCCATGATTTTAGCTGGAATAGGTTCAGTGGATCATTGACTTCGTTCGAAGTGGGAGAAGTTCTTTTGGCTAATGGTCACAAGTTCTCATACAAACTGTTGCTTAATAGCAACCAGTTCAATGGATCACTTCCCATCGATCTTGTCTCGAACTGTAACGATATGACGAGCGTTTCGGTTAACTTGAGTTCAAACTCAGTATCAGGTGAGATTTCTGATGCATTTTTCCTCCATTGTCGACAGATGATCGAATTTGAAGCTGCAAGCAATGAATTAGATAACTCGATTGGACCTGGAATTGGTGACTTGCAGAGGCTTGTTCATCTCGACTTGAGAGAGAATAGATTATCTGGAGTTTTACCTGATCAGTTGGGGAACTTGCAGAGTTTGAAATGGATGCTTTTGGGTGGAAATAATTTGTCTGGAGAGATTCCATCTCAACTTGGTCGATCGACTTCTCTAGTGAGTTTAGATCTTTCTCGAAACGAATTTACAGGCGTTATCCCTGAAAGCTTATCATATGCTTCTAGACTTGAGATTCTGTTGCTTGATCATAACTGGTTATCTGGGGAAATACCAGCATCTTTCTCTGCTCTTTCTCATCTCACTAAATTGGATGTCTCTTTTAACAACCTTTCTGGCCACATTCCTCATCTTCAGCACATGATTGACTGCATTTACTTTGATGGGAACAAGTTTCTGCATCCATGCCCGGAGTCGTACTCCGACTCCCCAGCTGGACTTCCAGTTCCTCTCAACGTCGAGAAGTGGAAGAGACAAAGAAAGTTCATGTCCATGGTAATCGCTGTGGCTGCTTCCTCAACTCTAATTTGCTTACTCTTAATGATAGCTGTTATTATCATTGTTAAGAAAAGGCTTGATAGACAAAATAGGTTAAAGAAAAGACAAGTGGTGACTTTCTCTGATGCTCCGTCCGATCTGAATTATGATAATGTTGTCCGAGCGACCGAGAATTTCAGCCTTCGCTACCTAATCGGTACTGGTGGCTTTGGGTCGACATACAAGGCTGAACTGCCCTCAGGTTTCCTGGTTGCTGTTAAGAGACTGTCCATTGGTAGGTTTCAAGGAGGCATCCAACAATTCGACGCGGAGATTCGAACACTGGGAAGAATACGACACAAAAACCTTGTAACTCTTCTCGGATACTACGTCGGAGAGGCTGAAATGTTCTTAGTTTACAACTATCTTTCTGGTGGGAACCTTGAGACCTTCATTCATGAAAAATCGTGCAAACACGTAAAGCACTCGGTAATCCATAAGATTGCTTTGGACATAGCGAGGGCTCTTGCATACCTTCATTACTCCTGTGATCCTAGGATTGTTCATAGAGACATCAAGCCTAGTAACATCCTGCTTGATGAAGACCACAACACCTTCATATCAGATTTTGGGTTAGCCAGGCTTCTTGAGGTATCAGAGACTCATGCCACAACAGATGTGGCAGGAACATTTGGATATGTTGCACCAGAATACGCAACCACTTGCAGGGTCTCGGATAAGGCCGATGTTTATAGCTTTGGAGTTGTGCTGCTAGAGTTGCTTTCTGGAAAAAGGTCGCTCGACCGATCCTTTTCTGACTTTGGGAACGGATTTAACATTGTTACATGGGCAAAAATGCTGATCAAGGAAGGTCGTTCTTCTGAGCTTTTCACTCCTGAACTTTGGGAAATGGGACCTGAGGAACACTTACTTGGAATGTTAACGCTCGCGTCTAATTGCACAGTTGAAATTCTCGCTCTTCGACCGTCGATGAAGCAGGTCGTCGAGACACTGAAACAGTTGTAA 3135 43.0 MSSSSLSWFLLLSLSFTFSGTSGSVSYDAMSLLRFKGSISLDGSDVLRGWNLSVSHCDWFGVTCDGVTGRVVGLNISGSGGVMAADSVLAGTLNPAIGNLTELRVLSLVNNLMYGEIPRSVGKLQSLEILELQGNNFSGEIPKQIRSLRSLRLLNLSDNSFSGSIPSKLIGSTKLEAIDLSYNQLSGSIQVVGNRCGVLNHLRLSHNFLTDNIPAEIGQCRKLRTLLLDGNILEGQIPAEIGQISELRILDISRNSLTDSIPKELGNCRKLSQIVLTNLNDTNPDYDSLSGEFNAFNGGIPSELLLLPSLQVFWAPRGNFNGKLPNNWSSSCSLRVLNLGQNYITGTIPESIGNCANLTYLDLSSNKLQGNLPVQLRVSCMAYFNVSQNKISGVLPRFEKDSFRMNMIPHEPASRFLDDEDNWNSYINSPVWDFPRLNDNLIIAHDFSWNRFSGSLTSFEVGEVLLANGHKFSYKLLLNSNQFNGSLPIDLVSNCNDMTSVSVNLSSNSVSGEISDAFFLHCRQMIEFEAASNELDNSIGPGIGDLQRLVHLDLRENRLSGVLPDQLGNLQSLKWMLLGGNNLSGEIPSQLGRSTSLVSLDLSRNEFTGVIPESLSYASRLEILLLDHNWLSGEIPASFSALSHLTKLDVSFNNLSGHIPHLQHMIDCIYFDGNKFLHPCPESYSDSPAGLPVPLNVEKWKRQRKFMSMVIAVAASSTLICLLLMIAVIIIVKKRLDRQNRLKKRQVVTFSDAPSDLNYDNVVRATENFSLRYLIGTGGFGSTYKAELPSGFLVAVKRLSIGRFQGGIQQFDAEIRTLGRIRHKNLVTLLGYYVGEAEMFLVYNYLSGGNLETFIHEKSCKHVKHSVIHKIALDIARALAYLHYSCDPRIVHRDIKPSNILLDEDHNTFISDFGLARLLEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELLSGKRSLDRSFSDFGNGFNIVTWAKMLIKEGRSSELFTPELWEMGPEEHLLGMLTLASNCTVEILALRPSMKQVVETLKQL 1044
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4281191 4284325 + Carg01397-RA Car15g00758 162595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00758 1044 ProSiteProfiles Protein kinase domain profile. 769 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00758 1044 ProSitePatterns Protein kinases ATP-binding region signature. 775 797 IPR017441 GO:0005524
Car15g00758 1044 Pfam Protein kinase domain 774 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00758 1044 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Car15g00758 1044 Pfam Leucine Rich Repeat 247 268 IPR001611 GO:0005515
Car15g00758 1044 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Car15g00758 1044 Pfam Leucine rich repeat 333 368 IPR001611 GO:0005515
Car15g00758 1044 Pfam Leucine rich repeat 596 655 IPR001611 GO:0005515
Car15g00758 1044 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01013 Car-Chr14:8469010 Car15g00758 Car-Chr15:4281191 0 dispersed
Car15g00758 Car-Chr15:4281191 Car17g00105 Car-Chr17:653769 1.64E-139 dispersed
Car15g00758 Car-Chr15:4281191 Car01g00405 Car-Chr1:2313601 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89399 PF00069 Pkinase 6.10E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00758 - - cpep:111809121 2002.25