Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00765 ATGGCGCTCTCTGATAAACCTTCTCGCCAATCTCTCATCCCCAACTTCCTCTACTCTTCCTCTTCTTCCACTCGAACCCTCCCCTTGAAGAAGATGCTTCAGTCTCCACCCACTCTCGATGGCGTTTCTTCTTCTCCTAAGAGCTTTGTCATTCCCGCTCCCAGCGAGCCGTCTAAGAAGATCGAGATGTACTCGCCGGCCTTCTACGCTGCTTGTACTTTTGGTGGAATTCTCAGCTGTGGTCTCACGCACATGGCTGTTACTCCTCTTGATTTGGTTAAATGCAATATGCAGATTGACCCTGCGAAATACAAAAGCATTTCGTCTGGTTTCGGGGTTTTGCTCAAGGAGCAGGGTGCGAGGGGTTTCTTCAGGGGCTGGGTGCCTACCCTCCTTGGCTACAGTGCACAGGGTGCCTGCAAGTTTGGCTTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCAACGAAGTACAAGACCTTGATCTACCTTGCCGGTTCTGCATCTGCTGAGGTGATTGCTGATATTGCACTTTGCCCCTTTGAAGCCGTGAAGGTTCGGGTTCAAACTCAGCCTGGTTTTGCTAGAGGACTGTCTGATGGACTTCCCAAATTTGTCAGATCTGAAGGAACACTAGGGTTGTACAAGGGTTTAGTTCCACTATGGGGTCGCCAGATTCCATACACAATGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGCTATACAAGTATGCCATTCCCAGGCCAAAAGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATCGTGTCTCATCCCGCTGATAATCTCGTGTCGTTCCTCAACAATGCCAAAGGAGCAACCGTTGGTGATGCTGTCAAGAAGCTCGGGTTATGGGGTCTCTTCACTCGTGGGCTACCCCTCCGAATTGTGATGATTGGAACTCTTACTGGTGCTCAATGGGGTATCTACGATGCATTCAAAGTTTTTGTTGGACTACCTACTACTGGTGGCCCTGCACCTGCTGCCCCCGCACCTGCTGCTTCTGAGCTCACAAAGGCGTGA 1107 49.41 MALSDKPSRQSLIPNFLYSSSSSTRTLPLKKMLQSPPTLDGVSSSPKSFVIPAPSEPSKKIEMYSPAFYAACTFGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGARGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYATKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAPAPAASELTKA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4337829 4340579 + Carg01390-RA Car15g00765 162602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00765 368 Pfam Mitochondrial carrier protein 167 252 IPR018108 -
Car15g00765 368 Pfam Mitochondrial carrier protein 70 153 IPR018108 -
Car15g00765 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Car15g00765 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Car15g00765 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00018 Car-Chr10:95616 Car15g00765 Car-Chr15:4337829 0 dispersed
Car11g00008 Car-Chr11:42978 Car15g00765 Car-Chr15:4337829 1.55E-39 dispersed
Car11g01274 Car-Chr11:10624424 Car15g00765 Car-Chr15:4337829 0 dispersed
Car11g01419 Car-Chr11:11599927 Car15g00765 Car-Chr15:4337829 5.65E-56 dispersed
Car14g00690 Car-Chr14:3799873 Car15g00765 Car-Chr15:4337829 1.70E-13 dispersed
Car15g00765 Car-Chr15:4337829 Car03g00350 Car-Chr3:4424383 1.08E-09 dispersed
Car15g00765 Car-Chr15:4337829 Car04g02143 Car-Chr4:17423269 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00765 K15102 - csv:101221771 661.759