Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00768 ATGTCAACCCAGCACCAGAATGCGGATTCTAATGCCGTTTCAGATTCAGAAATGCCAGGCTGGGACTGCAGTCGAACGCTGTCTGGTATTACATCTTCATCTCTCAATATCTTTCACTTATTAAGGAATATTTTTGAAAGAAGATGGAGCCAAATCCTGGAGGAAGTGTTAAATGTCGGAAATGCAATGTTTTGTCAACCTGCTGAGTCGATGACAAGTTTTCCTAAAGAAACTCAACCTCAGGAGATTAATGCAGAAACACAAAGCTGGAACTGGAAGAATGATCAACAGCTCTCTGGACCCCAGAAAAGATTGGAAGATCTCTTGTGTCAGCCTGGTAACAACTTGTGTGCAGATTGCGGATCACCGGATCCAAAATGGGTATCGTTAAATTTGGGAGTGTTTATCTGTATAAAGTGTTCTGGAGTACACAGAAGTCTAGGAGTTCATATCTCTAAGGTTTTCTCAGTGAAACTAGATAATTGGACAGACGAACAAGTCGATACTTTGATGAGCATCGGTGGAAACACAGATGTAAACATGAAGTATGAAGCTTGCATCACCGATGGGCACATAAAACCGAAACCAGATTCCTGTATAGAGGAGCGCCACGACTTCATAAGGAGAAAGTATGAACTGCTGCAATTTTATAACGCCAGCATTCAAAATTCTAGTGATAACAACTTATTGAATAAAAGCAGTTCATCATCCTCCCTAAGTAACATCCCAAGCAACAATGGTACCAACGACAAAAGGCCATATGAGAAACAACCTACTAGGTATCGCATTGGGCATGTATTTCGTACCAGCCGGATAATTAGAAGAGATAGTGAGCAGAAGACTTTAGACAAGAGAGGCCCTTCAGTCTCCAGACAAACATCGGCAGGTATGGTTGAATTTGTTGGCTTGGTTAAGGTCAATGTGGTTAGAGGCACAAACCTAGCTGTCCGAGACGTGGTGACCAGCGACCCCTACGTAATTCTCATGTTGGGTCAACAATCAGTGAAGACTCGTGTTATTAAGAGCAACCTTAACCCAGTTTGGAACGAGAGATTAATGTTGTCAATTCCCGAGAATATCCCTCCATTAAAAGTGCTCGTCTATGATAAGGACACATTTTCAACTGATGACTTCATGGGTGAGGCTGAAATCGACATTCAACCGTTGGTCGCTGCGACCAAGGCGTATGAGAAGTCCACAATTGATGAATCAATGCAGCTGGGAAAATGGGTGGCGAGTACCGACAATATCTTGGTAAAAGATGGGGTCATTAACCTTGTAGATGGAAAGGTCAGACAGGATATTTCTCTAAGATTGCAGAATGTGGAGAAAGGTGTCCTTGAGATTGAGCTAGAATGCATTCCTCTCACACAG 1374 42.65 MSTQHQNADSNAVSDSEMPGWDCSRTLSGITSSSLNIFHLLRNIFERRWSQILEEVLNVGNAMFCQPAESMTSFPKETQPQEINAETQSWNWKNDQQLSGPQKRLEDLLCQPGNNLCADCGSPDPKWVSLNLGVFICIKCSGVHRSLGVHISKVFSVKLDNWTDEQVDTLMSIGGNTDVNMKYEACITDGHIKPKPDSCIEERHDFIRRKYELLQFYNASIQNSSDNNLLNKSSSSSSLSNIPSNNGTNDKRPYEKQPTRYRIGHVFRTSRIIRRDSEQKTLDKRGPSVSRQTSAGMVEFVGLVKVNVVRGTNLAVRDVVTSDPYVILMLGQQSVKTRVIKSNLNPVWNERLMLSIPENIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLVAATKAYEKSTIDESMQLGKWVASTDNILVKDGVINLVDGKVRQDISLRLQNVEKGVLEIELECIPLTQ 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4349247 4357379 - Carg01387-RA Car15g00768 162605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00768 458 MobiDBLite consensus disorder prediction 227 260 - -
Car15g00768 458 MobiDBLite consensus disorder prediction 227 252 - -
Car15g00768 458 Pfam C2 domain 303 393 IPR000008 -
Car15g00768 458 ProSiteProfiles ARF GTPase-activating proteins domain profile. 102 226 IPR001164 GO:0005096
Car15g00768 458 Pfam Putative GTPase activating protein for Arf 103 218 IPR001164 GO:0005096
Car15g00768 458 ProSiteProfiles C2 domain profile. 285 400 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00052 Car-Chr7:343146 Car15g00768 Car-Chr15:4349247 9.41E-69 dispersed
Car13g00382 Car-Chr13:6365479 Car15g00768 Car-Chr15:4349247 1.57E-116 dispersed
Car15g00768 Car-Chr15:4349247 Car18g00478 Car-Chr18:3183455 5.69E-91 dispersed
Car04g01414 Car-Chr4:8209689 Car15g00768 Car-Chr15:4349247 3.87E-171 transposed
Car18g00794 Car-Chr18:9040590 Car15g00768 Car-Chr15:4349247 2.75E-165 transposed
Car15g00768 Car-Chr15:4349247 Car04g02140 Car-Chr4:17411312 4.76E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00768 K12486 - csv:101215531 593.193