Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00770 ATGTTATCTGTTGTACTCTTAATGACAGTTCTGAATTCAATTTTTTTAAAAGGAAAGATTGATTCTGTATCAAATTTTGTGCGTATGTTCAGGTGGAGGTATAAAACTGGCTTTGTAAGGATGGCATCTGGAGGTCCTTATTTTGATGATTTGCGGAGCAAACCAGAGGTTATTGATCCTCCCCAGAATGAAGATATGATGGACATCAGGGAAACTGTGGACGATCCAGCTCAAAATGAACTTAAACCGAACATTGCTGTTTCGAGCAGCGTTCGCGATCTCTTGGAATGTCCGGTGTGTTTGAATGCAATGTACCCTCCAATACATCAGTGTTCAAATGGTCACACACTGTGTTCTGGTTGCAAGCCTCGGGTGCACAATCGCTGCCCGACGTGCAGGCACGAACTTGGGAATATTAGATGTCTTGCATTGGAGAAGGTGGCTGCATCTCTAGAACTTCCGTGTAAATATCAGAGCTATGGTTGCATTGGCATATATCCATATTACAGCAAGGTCAAACATGAATCCCAATGTGTTTATAGACCTTATAGCTGTCCATATGCTGGATCGGAATGTTCAGTCGTCGGTGATATACCCTATTTGGTGGCTCACCTGAAAGATGATCATAAAGTAGACATGCACAGTGGAAGCACATTCAACCATCGATATGTAAAATCGAACCCTCAAGAAGTTGAAAACGCTACGTGGATGCTAACGGTTTTCAGTTGCTTTGGTCAATACTTTTGCCTGCATTTCGAAGCTTTCCAGCTAGGGATGGCTCCAGTATACATAGCCTTTTTGCGGTTCATGGGGGACGATAACGATGCAAAGAACTACAGCTATAGACTCGAGGTGGGAGGAAATGGGAGGAAGATGGTATGGCAAGGGGTGCCCAGAAGCATCAGGGACAGCCATCGGAAAGTTCGGGACAGTTTTGATGGGCTCATTATCCAACGCAACATGGCTCTTTTCTTCTCTGGTGGCGATCGGAAGGAACTAAAGCTTAGGGTGACTGGTAGAATTTGGAAAGAACAGTGA 1038 44.22 MLSVVLLMTVLNSIFLKGKIDSVSNFVRMFRWRYKTGFVRMASGGPYFDDLRSKPEVIDPPQNEDMMDIRETVDDPAQNELKPNIAVSSSVRDLLECPVCLNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSYGCIGIYPYYSKVKHESQCVYRPYSCPYAGSECSVVGDIPYLVAHLKDDHKVDMHSGSTFNHRYVKSNPQEVENATWMLTVFSCFGQYFCLHFEAFQLGMAPVYIAFLRFMGDDNDAKNYSYRLEVGGNGRKMVWQGVPRSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4362429 4364822 - Carg01385-RA Car15g00770 162607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00770 345 ProSiteProfiles Zinc finger SIAH-type profile. 150 210 IPR013010 GO:0008270
Car15g00770 345 ProSiteProfiles Zinc finger RING-type profile. 97 133 IPR001841 -
Car15g00770 345 Pfam Seven in absentia protein family 139 338 IPR018121 GO:0005737|GO:0006511|GO:0007275
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00770 Car-Chr15:4362429 Car16g00044 Car-Chr16:313640 7.36E-170 dispersed
Car04g01415 Car-Chr4:8213940 Car15g00770 Car-Chr15:4362429 0 transposed
Car18g00793 Car-Chr18:9035299 Car15g00770 Car-Chr15:4362429 0 transposed
Car04g02220 Car-Chr4:18032859 Car15g00770 Car-Chr15:4362429 5.12E-19 transposed
Car15g00770 Car-Chr15:4362429 Car04g02137 Car-Chr4:17393376 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00770 K04506 - csv:101220834 635.95