Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00784 ATGGGTGTTGCTGTTGAATCTACTCGATTTCATGTTCTTGCTGTTGATGATAGCTTCATCGATAGGAAATTGATCGAGCGCCTCCTCGAAACCTCGTCCTATCATGTTACTGTTGTTGATTCCGGCAACAAGGCCTTGGAATTTCTTGGTCTTGTTGGAGATCATGATGATGATGATGATGATGAACCGGACTCCCAAATCGCTCCCTCAAATCATCATCAAGAAGTGGATGTAAATTTGATCATCACGGATTACAGTATGCCTGGAATGAGCGGCTACGATCTCCTCAGGAAGATCAAGGAATCGAAATCTCTTAAAGACATACCGGTTGTGATTATGTCCTCTGAGAATGTACCTTCAAGAATCAACAGATGCTTGGAAGAAGGAGCGGAAGAATTCTTCCTCAAACCAGTTCAATTGTCTGACGTGAGGAAATTGAGACCTCATTTGATTAAAGAAAAATCCTCAAGGAATTGA 477 41.93 MGVAVESTRFHVLAVDDSFIDRKLIERLLETSSYHVTVVDSGNKALEFLGLVGDHDDDDDDEPDSQIAPSNHHQEVDVNLIITDYSMPGMSGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVRKLRPHLIKEKSSRN 158
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4455898 4457199 - Carg01371-RA Car15g00784 162621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00784 158 MobiDBLite consensus disorder prediction 52 73 - -
Car15g00784 158 Pfam Response regulator receiver domain 12 145 IPR001789 GO:0000160
Car15g00784 158 ProSiteProfiles Response regulatory domain profile. 11 151 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00131 Car-Chr3:2281271 Car15g00784 Car-Chr15:4455898 9.62E-70 dispersed
Car14g00475 Car-Chr14:2529750 Car15g00784 Car-Chr15:4455898 7.53E-72 dispersed
Car15g00618 Car-Chr15:3430886 Car15g00784 Car-Chr15:4455898 1.45E-52 dispersed
Car15g00784 Car-Chr15:4455898 Car04g02124 Car-Chr4:17295013 3.78E-91 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4836 PF00072 Response_reg 5.60E-20 CL0304 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00784 K14492 - csv:101210839 258.07