Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00809 ATTTCCTCGGTGGCCATGAATGGAGATGTAGCGACGGTGGTAACGGCGGCCGCACCGATGGGTTCAGCAGAGCCCCAGTACGTAAGGGCTAAGACTTCTGTATGGTGGGACATCGAGAACTGTCAGGTCCCTAAGGGCTGCGATCCTCACGCAATCGCCCAAAACATCAGCTCCGCCCTCGTGAAAATCAACTACTGCGGTCCTGTTTCCATTTCCGCCTACGGAGATACTAATCGCATTCCCAACTCTATTCAGCAAGCTCTCTCCAGTACTGGCATCGCCTTGAATCACGTCCCTGCCGGTGTTAAAGATGCAAGTGACAAGAAGATTCTAGTCGATATGTTGTTTTGGGCGGTCGATAACCCTGCTCCTGCAAATTATTTGCTAATTTCCGGTGATAGAGATTTTTCTAACGCGCTTCATCAATTAAGGATGAGAAGATATAATATTCTTCTTGCACAGCCACAAAGGGCTTCTGCACCACTAGTTGCAGCAGCAAAGAGTGTTTGGCTTTGGATGAGTCTTGTAGCTGGAGGACTTCCAATATCCAGTGCGGAATCATCTCAACTCGTGAACGGTACCCTTACTTCTGACCCTCAAATATCTCAGAACTCTGGACTTGATCATAATCAGCAGACAGCACAAGCTATAGTATACCAACCTGAAAATGTCTCTTTGGGAAACAACAAACATCAAGGTAAATCTATACATAAAAACTCCAACCAACCAGTCCTATCCAGAGCCTTAAGCTCGCCTGTTTCTAGGCACGAGGAAAGCCCTAGTTTTTTAAACCAACCAAATCATATCCAAGCAAAGCAGTTTAAGAAAGCACCTCATGAATTCTTCGGTAATAGCGGTAATAGCAGTTCTGTAGCCTCTTCTAGTCAGTCTACTCCAAACCTGTTTATTGAAAATTACACTCATGCTAGGACTGATGGTAGTGTTTCAATGGGTAGTTCCTCGAGTTACCAGCCTCCTCACGTGAGGCAAAAAACAATGCAGCTCCATCCTCCTTTTCGGCCAGATTATGTTTTTTCTCCTAACCCCGTTAATCGTAATTCTATCCCAGTCCCTACTCAACCCGATCCCTCTGCACCCAATATCAGTAAGCTGCATATCTCTGATCACCCCAATTATGCTATAAATCCTCAAAATTTTCATCATCAAGCTAGTGAATTTAGACCACATACTAGGTTTCAAAACTTTGCCAACTTTAACTTGCCAGACAAAGGCCGTAGTCAGCATGGTAGCCAGTCATTCCATCATGATGCGTTGAATAAACGACATGCTCGTGATGTAGAGTATGCACCTCATTCATCTTCCACCACTCTTGTTAGAAGTTCTTCTTATAATGATGCCTGGGGATCTCAGGGGCAACCACCACCTTCGGAGTACATTCAAGGCCTTATTGGAGTTATTCTTCTTGCATTAAACACCCTGAAAATGGAAAAAATTAGTCCAAATGAGGCAAATATAACTGAGTGCATCCGATATGGAGACTTGAGAAACTGCAATACTGATGTAAAAATGGCACTAAATAGTGCAATAGAGCATAATATGGTAGTGAGGCATAATTTTGGAGCTGTGCAATTGTATGTTGGTAAAACAGAAAAATTGTGGAAGTGTGTGAACCCTCTAGGTGGGCATCCCAATCAATACCAAAAAGCTATATGGGATAAGATTCAGAATTTTTTGGCTTCTCCAGCTGGTCGTTCTGCAATAATGGCTTCTTCTTGCAGATATCAAGCAGCATTGATTCTAAGGAACGAATGCTTAACCGATTTTGCCTTGGGCGATGTGCTTCAGATTTTGTATATGATAACCTCAATGAAGAAATGGATTACTCATCATATTTCAGGATGGCAGCCAATTAATATTATGCTAACAGAAGGTAATACATATGGAAGTTCAAGAACTGAACTTTGA 1926 42.89 ISSVAMNGDVATVVTAAAPMGSAEPQYVRAKTSVWWDIENCQVPKGCDPHAIAQNISSALVKINYCGPVSISAYGDTNRIPNSIQQALSSTGIALNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQRASAPLVAAAKSVWLWMSLVAGGLPISSAESSQLVNGTLTSDPQISQNSGLDHNQQTAQAIVYQPENVSLGNNKHQGKSIHKNSNQPVLSRALSSPVSRHEESPSFLNQPNHIQAKQFKKAPHEFFGNSGNSSSVASSSQSTPNLFIENYTHARTDGSVSMGSSSSYQPPHVRQKTMQLHPPFRPDYVFSPNPVNRNSIPVPTQPDPSAPNISKLHISDHPNYAINPQNFHHQASEFRPHTRFQNFANFNLPDKGRSQHGSQSFHHDALNKRHARDVEYAPHSSSTTLVRSSSYNDAWGSQGQPPPSEYIQGLIGVILLALNTLKMEKISPNEANITECIRYGDLRNCNTDVKMALNSAIEHNMVVRHNFGAVQLYVGKTEKLWKCVNPLGGHPNQYQKAIWDKIQNFLASPAGRSAIMASSCRYQAALILRNECLTDFALGDVLQILYMITSMKKWITHHISGWQPINIMLTEGNTYGSSRTEL 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4571769 4574467 - Carg01346-RA Car15g00809 162646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00809 641 MobiDBLite consensus disorder prediction 225 267 - -
Car15g00809 641 MobiDBLite consensus disorder prediction 403 426 - -
Car15g00809 641 Pfam NYN domain 31 167 IPR021139 GO:0004540
Car15g00809 641 Pfam OST-HTH Associated domain 578 631 IPR025677 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00410 Car-Chr2:3210402 Car15g00809 Car-Chr15:4571769 3.98E-16 dispersed
Car04g00468 Car-Chr4:2647164 Car15g00809 Car-Chr15:4571769 1.39E-30 dispersed
Car15g00809 Car-Chr15:4571769 Car16g00322 Car-Chr16:1980612 1.05E-30 dispersed
Car15g00809 Car-Chr15:4571769 Car20g00940 Car-Chr20:10318018 8.17E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00809 - - cmo:103503825 1046.19