Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00821 ATGGCGTCGTCTAATTCTTGTTCAAAAGCCCATGAATCCGTACATTCATCACCATTTGCTTCTCGCTATGTTCAAAACCCAACCCCAAAATATGTAATGCCTGAAAACTCCATGTCCAAGGAGGCAGCAGCTCAGATCATCAACGACGAGCTCATGCTAGATGGCAACCCACGTCTCAATTTGGCATCCTTCGTCACCACATGGATGGAGCCCGAATGCGACAAGCTAATCATGGATTCCATCAATAAAAACTACGTCAATATGGACGAGTACCCTGTTACCACCGAGATTCAAAATCGGTGTATCAACATGATCGCCCATTTATTCAACGCACCATTGGGAGATTCCGATGTAGCGGTGGGAGCTGGGACGGTGGGGTCGTCAGAAGCCATCATGTTGGCAGGGCTTGCCTTCAAGAGGAAGTGGCAGAGCAAGCGGAAGAGTGAAGGGAAGGCTTTTGATAAGCCTAATCTTGTGACGGGTGCTAATTTTCATGTTTGTTGGGAGAAATTTTGTAGGTATTTTGAAGTGGAGTTAAGGGAAGTTAAAGTTAGAGAAGGGTATTATGTTATGGACCCTTTTGAGGCTGTTGAGATGGTGGATGAGAACACTATTTGTGTTGCTTCAATTTTTGGTTCCACTTATAATGGGGAATTTGAAGATGTGAAGGCGTTGAATGATTTGTTGATGAAGAAGAATAAGGAAAGTGGATGGGATACGCCTATTCATGTGGATGCGGCTAGTGGTGGGTTCATAGCGCCGTTTTTGTATCCACACCTGGAATGGGACTTCCGGCTTCCTTTGGTGAAGAGTATCAATGTGAGTGGGCATAAGTATGGGCTTGTGTATGCTGGGATTGGGTGGGTCATTTGGAGAACTAGACAAGACTTGCCTCAACAACTCATTTTTCATATTGATTATCTTGGAGCTGATCAGTCTACCTTCACTCTCAACTTCTCCAAAGGGTCAAGCCAGGTGATTGCTCAGTATTATCAATTAATCCGTCTGGGTTTTGAGGGATACCGCAAGGTGATGCAAAACTGTCGCGACAACGCCATGGCATTGAAGGAAGGACTACAAAACACGGGGCGATTCACGATAGTGTCAAAGGACATCGGCGTGCCCGTGGTGGCATTTTGCCTCAAAGACCGAAGTACCCACGACGAGTTTGAGGTGTCGGAGATGTTGCGGCGGTTCGGGTGGATTGTGCCCGCATATCGAATGCCGAAGGGAGCCAAGCATGTATCCGTTCTTCGTGTTGTGGTTAGAGAAGATTTCTCCCGCGCCCTTGCAGAGCGGCTTTTGGTTGATATCATTAAGGTGTTGGCGGAGCTTGATACTCTTCCACCCAAAAATGCTGCGAAAGCCACCGCCTTAGCGAAGGACGAGGATGCAGCGAATGATAGCGCAGTGAAGAAGACGGCAGAGGAGACAGAAATGGAAATTGTGAATGCTTGGATCGACATGATAACAAAGGCTACCAAAATCACTTGTTGCTGA 1500 46.87 MASSNSCSKAHESVHSSPFASRYVQNPTPKYVMPENSMSKEAAAQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVNMDEYPVTTEIQNRCINMIAHLFNAPLGDSDVAVGAGTVGSSEAIMLAGLAFKRKWQSKRKSEGKAFDKPNLVTGANFHVCWEKFCRYFEVELREVKVREGYYVMDPFEAVEMVDENTICVASIFGSTYNGEFEDVKALNDLLMKKNKESGWDTPIHVDAASGGFIAPFLYPHLEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTRQDLPQQLIFHIDYLGADQSTFTLNFSKGSSQVIAQYYQLIRLGFEGYRKVMQNCRDNAMALKEGLQNTGRFTIVSKDIGVPVVAFCLKDRSTHDEFEVSEMLRRFGWIVPAYRMPKGAKHVSVLRVVVREDFSRALAERLLVDIIKVLAELDTLPPKNAAKATALAKDEDAANDSAVKKTAEETEMEIVNAWIDMITKATKITCC 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4669021 4671598 - Carg01334-RA Car15g00821 162658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00821 499 Pfam Pyridoxal-dependent decarboxylase conserved domain 34 382 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02094 Car15g00821 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02196 Car-Chr4:17872717 Car15g00821 Car-Chr15:4669021 0 dispersed
Car15g00556 Car-Chr15:3068417 Car15g00821 Car-Chr15:4669021 3.92E-09 dispersed
Car15g00712 Car-Chr15:3952208 Car15g00821 Car-Chr15:4669021 0 dispersed
Car15g00821 Car-Chr15:4669021 Car15g00822 Car-Chr15:4681930 3.46E-39 tandem
Car08g00150 Car-Chr8:898358 Car15g00821 Car-Chr15:4669021 7.80E-15 transposed
Car15g00821 Car-Chr15:4669021 Car04g02093 Car-Chr4:17086712 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00821 K01580 - csv:101208026 821.617