Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00825 ATGGAAAGAACTGTCTTTCACCTTTCACTTCTTCCTCTTGCTTTGCCACTGATCTTTATCTTCTTTGATTTGGCTTCATCAGCAGAGCAACAGGTCGTGACTTCAATAAAAACTGATGCTGCAGCTCTTCTTAAGTTCAGGGCTTTGATTGAGAAGGACCCAAATGGAGTATTGACCAATTGGAAGCTTGAAAACGATCCATGTTCTTGGTATGGAGTTTCATGCCAATCTGGACGAGCGGTTGCTCTTGATCTGAGCGGCTGTAATCTTGCAGGGAATGTTTATTTTGATCCTCTGTCTTCTATGGATATGTTGTTGTCTTTGAACTTGTCTACAAATTCTTTCACTATAAACTCAACCACTTTGCTTCAACTTCCTTATAATTTGCAGCAACTTGAGCTCTCTCTTGCCAAAGTTGTAGGTCGTGTGCCTGATAGTCTTTTCTCAAGCTGTCCAAATCTTGTGTTTGTGGATCTTTCATTCAACAACTTGACTGCCTCTCTGCCTGAAAATCTTCTGTTCAATGCTAATAAGCTTCAAGATCTTGATCTCTCTTACAATAATCTAACAGGGTCCATCTCAGGATTGAGAATTCATGAGAATTCTTGCAATTCTTTGTTGCGAGTTGAACTTTCAGCTAATCAAATCGTTGGTTCGATTCCGAGTTCAATTTCGAACTGCACGAATCTGCAAACACTTGGTTTGTCATACAATTCTCTCAGTGGGGAAATCCCAGGATCTATAGGGGAACTCAGTAGTTTACAAAGGGTGGATCTATCTCATAACCAGCTCACTGGTTGGCTCCCTTTTGATTGGAGAAATGCCTGCAATTCACTTCAAGAACTAAAGCTTTGTTACAACAACATTTCTGGTGTAATTCCTGCTTCCTTCTCTGCTTGTTCTTCCCTTCAGATTCTGGATCTTTCAAACAACAACATATCTGGTCCTTTACCAGATGCCATCTTCAAGAATCTTGTCTCTTTACAGAGCTTGTTATTGAGTAATAACATAATCTCTGGATCATTGCCTTCATCCATATCTCACTGCAAGAAACTTCAGCTTGTGGACTTAAGTTCCAATAGAATTTCTGGTTTAATCCCACCAGATATATGCCCAGGAGCTGAATCACTCCAGGAACTGAAAATGCCAGACAATCTCATCATAGGAGGAATCCCACCAGAACTCTCGTTGTGTTCACAGTTAAAGACAATTGATTTTAGTCTAAACTATCTGAATGGCTCCATACCTGCAGAACTTGGAAGGCTTCAGAATCTTGAACAGTTGATAGCATGGTTCAATAGCTTAGAAGGGAAAATCCCACCAGAATTAGGAAAGTGTAGAAGCTTGAAGGATCTTATACTGAATAATAATCGTTTAAGTGGCGAAATCCCCACTGAATTGTTCAGTTGTAGCAATCTTGAATGGGTTTCACTCACTAGTAATGAACTCAATGGTGAAGTCCCAAAAGAGTTTGGTCTTTTGTCAAGGCTGGCTGTGCTGCAACTCGGGAACAATAGCTTAAGTGGTCAGATACCAGGAGAGTTGGCAAACTGCAGCACTTTAGTTTGGATGGATTTAAACAGCAATAAGCTTACAGGGGAAATCCCTCCTAGACTTGGGAGGCAGCTTGGAGCCAAGTCATTGAATGGGATTCTTTCTGGAAACACTTTAGTGTTCGTCCGAAATGTTGGGAATTCGTGTAAAGGAGTTGGGGGTTTGTTGGAGTTTGCTGGAATTAGACCTGAAAGACTACAGCAGGAACCAACACTAAAGACCTGTGATTTCACTAGACTGTACTCTGGTCCGGTTCTAAGTCTGTTTACAAAGTACCAAACTTTGGAGTACTTGGATCTTTCTTACAATGAGCTTCGTGGGAGAATACCAGAAGAGTTTGGAGATATGGTTGCCTTGCAGGTTCTTGAATTATCACACAACCAACTTTCTGGAGAGATTCCGACCTCGTTCGGCCGCTTAAAGAACTTGGGAGTGTTTGATGCATCACATAACAGACTGCAGGGTCATATTCCAGATTCATTCTCAAACTTATCATTCTTAGTTCAAATTGATCTATCTTACAATGAACTAACAGGGAGAATTCCATCAAGGGGGCAGCTCAGTACACTGCCTGCAAGTCAGTATGCAAACAATCCAGGACTTTGTGGAGTTCCCTTGCCTGAATGCCAGAGTGAGGACCAGCCACTGACAAGTCCTAACGTTGAGCCTGGAAAAGGAAGAACAAAGGCAGAAGTAGGGTCATGGGTTAACAGTATTGTTTTAGGTGTTCTTATTTCCATTGCCAGTGTCTGCATTTTGATTGTATGGGCTATTGCCATGAGGACAAGACGAAAAGAAGCAGAGGAAGTGAAGATGCTCAATAGTTTACAAGCAATACATGCTCCTACTACATGGAAAATTGACAAAGAGAAAGAGCCATTGAGTATCAATGTGGCAACTTTCCAAAGACAACTAAGGAAACTCAAATTCTCCCAACTGATTGAAGCTACTAATGGCTTCTCAGCCGAAAGTCTCATTGGGAGTGGCGGGTTCGGTGAAGTGTTTAAGGCAACGCTAAAGGATGGATCGAGTGTTGCAATCAAGAAACTGATACGTCTTAGTTGCCAGGGAGACCGTGAATTCATGGCAGAAATGGAAACTTTAGGAAAGATCAAACATGGAAACTTAGTACCTCTTTTGGGTTACTGTAAAATAGGGGAGGAGAGGCTTCTAGTGTATGAGTTCATGGAGTTTGGTAGCCTAGAAGAGATGCTTCACGGAAGAGTAAAGATGCAGGGCAGAAGAATTCTAACATGGGATGAAAGGAAAAAGATTGCTAGAGGTGCTGCAAAAGGACTTTGTTTCCTACATCACAACTGCATTCCACACATAATACATAGAGACATGAAGTCAAGCAATGTACTCCTGGACCATGATTTAGAAGCAAGAGTTTCAGATTTTGGAATGGCTAGGCTGATAAGTGCTCTTGACACTCATCTGAGTGTAAGCACACTTGCAGGCACTCCTGGTTATGTCCCTCCTGAGTACTACCAGAGCTTCAGGTGCACGGCAAAAGGCGATGTCTATTCGTTCGGTGTCGTCCTGTTAGAACTCTTGACAGGGAAAAGACCAACAGATAAGGAGGATTTCGGGGACACCAACTTAGTGGGATGGGTGAAAATGAAAGTAAATGATGGAAAACAAATGGAAGTGATTGATCCAGAATTGCTGTCGGTAACCAAAGCAAGCGATGAATCAGAAGCAGAAGAGGTTAAAGAAATGGTTAGATATTTGGAGATAACTCTTCGGTGTGTAGAAGAGTTTCCTTCCAAAAGGCCTAACATGTTGCAGGTGGTGGCCATGCTGCGAGAATTGATGCCTGGATCAACCAATGGAAGCAGCAACAGTGCTTGA 3408 42.08 MERTVFHLSLLPLALPLIFIFFDLASSAEQQVVTSIKTDAAALLKFRALIEKDPNGVLTNWKLENDPCSWYGVSCQSGRAVALDLSGCNLAGNVYFDPLSSMDMLLSLNLSTNSFTINSTTLLQLPYNLQQLELSLAKVVGRVPDSLFSSCPNLVFVDLSFNNLTASLPENLLFNANKLQDLDLSYNNLTGSISGLRIHENSCNSLLRVELSANQIVGSIPSSISNCTNLQTLGLSYNSLSGEIPGSIGELSSLQRVDLSHNQLTGWLPFDWRNACNSLQELKLCYNNISGVIPASFSACSSLQILDLSNNNISGPLPDAIFKNLVSLQSLLLSNNIISGSLPSSISHCKKLQLVDLSSNRISGLIPPDICPGAESLQELKMPDNLIIGGIPPELSLCSQLKTIDFSLNYLNGSIPAELGRLQNLEQLIAWFNSLEGKIPPELGKCRSLKDLILNNNRLSGEIPTELFSCSNLEWVSLTSNELNGEVPKEFGLLSRLAVLQLGNNSLSGQIPGELANCSTLVWMDLNSNKLTGEIPPRLGRQLGAKSLNGILSGNTLVFVRNVGNSCKGVGGLLEFAGIRPERLQQEPTLKTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGRIPEEFGDMVALQVLELSHNQLSGEIPTSFGRLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSYNELTGRIPSRGQLSTLPASQYANNPGLCGVPLPECQSEDQPLTSPNVEPGKGRTKAEVGSWVNSIVLGVLISIASVCILIVWAIAMRTRRKEAEEVKMLNSLQAIHAPTTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAESLIGSGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHGNLVPLLGYCKIGEERLLVYEFMEFGSLEEMLHGRVKMQGRRILTWDERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHDLEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVLLELLTGKRPTDKEDFGDTNLVGWVKMKVNDGKQMEVIDPELLSVTKASDESEAEEVKEMVRYLEITLRCVEEFPSKRPNMLQVVAMLRELMPGSTNGSSNSA 1135
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4698262 4701669 + Carg01330-RA Car15g00825 162662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00825 1135 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Car15g00825 1135 Pfam Brassinosteroid receptor island domain 549 607 IPR045381 -
Car15g00825 1135 Pfam Protein kinase domain 840 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00825 1135 ProSiteProfiles Protein kinase domain profile. 838 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g00825 1135 ProSitePatterns Protein kinases ATP-binding region signature. 844 867 IPR017441 GO:0005524
Car15g00825 1135 Pfam Leucine rich repeat 278 336 IPR001611 GO:0005515
Car15g00825 1135 Pfam Leucine rich repeat 606 647 IPR001611 GO:0005515
Car15g00825 1135 Pfam Leucine rich repeat 206 264 IPR001611 GO:0005515
Car15g00825 1135 ProSiteProfiles Leucine-rich repeat profile. 178 200 IPR001611 GO:0005515
Car15g00825 1135 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car04g02087 Car15g00825 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00198 Car-Chr10:962190 Car15g00825 Car-Chr15:4698262 1.41E-145 dispersed
Car15g00825 Car-Chr15:4698262 Car16g00121 Car-Chr16:709313 1.68E-57 dispersed
Car15g00825 Car-Chr15:4698262 Car04g02087 Car-Chr4:17006651 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89400 PF00069 Pkinase 2.10E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00825 - - csv:101208987 2053.1