Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00826 ATGTTGAAACCTTCTTGTTCTTCTTCTTCTTCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATCCACACCTTATTCTTCTGCTGCCCCTCCTCTTCCTCCTCCCAATTCCGACCATGGCCTCACCACCAAAAGAAAAAGAAGACCCGCCGGCACTCCAGATCCGGATGCTGAACTCGTTTCATTCATTTTCTTATTAGATCCGGATGCTGAAGTCGTTTCCTTATCCCCCAAAACCCTTCTCGAATCCGATCGCTACGTTTGTGAGATATGCAACCAAGGGTTCCAAAGGGATCAGAATCTCCAAATGCACCGCCGCCGCCACAAGGTACCTTGGAAGCTACTCAAGAAGCCACACACGGTGGATGCCATCAAAAAAAAGGTCTTTGTTTGCCCCGAGCCGACATGTCTCCACCACGACCCTTGCCATGCCCTTGGTGACCTCGTCGGCATCAAAAAACACTTCCGCAGAAAACACAGCAACCAAAAGCACTGGGTTTGTGACAAATGCTCTAAAGCTTATGCTGTTCATTCCGATTTCAAAGCTCACCTCAAAACTTGCGGCACCCGTGGCCATTCCTGTGATTGTGGCCGTGTCTTTTCCAGAGTGGAGAGCTTTATAGAACACCAAGACGCTTGCAATATCCGCCAGATGAGGTCCGATCAGTGGCAGCTCATGCCATTATCACTCCCATTACTACAAACCGCTAATCCACTACGAGGATTTCCAATTTTATCATCAAACAAAGACCATGATCTCAATCTCCATCTCTCTTCTCCAAGCTCAGCCTTTTTGAATCTCTCAATTGGGTCCAACAAGGAGCCAAACGACAAGCGTCAGCTCGAGCTCGCAATCGAGGAGAAAGCATACGCAGACGAAGCAAGACGAGACGCGAAGCGACAAATCGAAATCGCCGAGGTTGAGTTTACCAATGCCAAAATGATAAGGCAGCAAGCTCAAGCGGAATTGGAAAAAGCAAGGATCTTGAAGGAAGAAGCCAGCCGGAAAATGAGCTCCACCATTATGGAAATCACATGTGAAACTTGTCGGTTACATTTTCACATGAGCTCCATCGCAGCAGCCGAGGAGACCTCGCTCGCCATCAGCTACATGTCGTCTGCTACGACAGAAGGTGATGGAGAATAA 1146 48.87 MLKPSCSSSSSAAAAAAAAAASTPYSSAAPPLPPPNSDHGLTTKRKRRPAGTPDPDAELVSFIFLLDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKKPHTVDAIKKKVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNQKHWVCDKCSKAYAVHSDFKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNIRQMRSDQWQLMPLSLPLLQTANPLRGFPILSSNKDHDLNLHLSSPSSAFLNLSIGSNKEPNDKRQLELAIEEKAYADEARRDAKRQIEIAEVEFTNAKMIRQQAQAELEKARILKEEASRKMSSTIMEITCETCRLHFHMSSIAAAEETSLAISYMSSATTEGDGE 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 4705386 4706742 - Carg01329-RA Car15g00826 162663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00826 381 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Car15g00826 381 MobiDBLite consensus disorder prediction 17 54 - -
Car15g00826 381 Coils Coil 312 336 - -
Car15g00826 381 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 108 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car13g00806 Car-Chr13:8865766 Car15g00826 Car-Chr15:4705386 1.16E-131 dispersed
Car15g00826 Car-Chr15:4705386 Car18g00079 Car-Chr18:417681 4.09E-124 dispersed
Car15g00826 Car-Chr15:4705386 Car04g02086 Car-Chr4:17000903 7.18E-92 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4839 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00826 K25871 - csv:101210468 561.992