Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00905 ATGAAGAGGGAGCATCACTATCTTCATCCTCGTCCGGAGCCGCCTTCCGTGGCTACTGGCTCTAATCGGGAGAGTTATTTGAACACTGGTAAGGCTAAGCTTTGGGAGGAGGAGGTACAGCTCGATGGAGGAATGGATGAGCTTCTTGCTGTCTTAGGTTACAAGGTTAAGTCGTCGGACATGGCGGAAGTTGCTCAGAAGCTGGAACAGCTTGAAGAAGCTATGTGTCAAGTTCAGGATACTGGCCTTTCGCATCTCGCTTTCGACACTGTTCATTATAATCCATCTGATCTGTCGACTTGGGTTGAAAGTATGCTCACTGAGCTCCATCCGCCGCCCCCTACCTCGCATCTGGACGATTCATCGTTTTTAGCTCCGGCGGAATCCTCCACCATCGCTAACATTGATTATGAACCTCAACTGCAAACCAGCAGCAGGATTTTCGAGGAGTCTTCTAGTTCGGATTATGACCTTAAAGCTATTACGGATAGCGCGATTTATTCACCGAGAGAGAGTAAGCGTTTGAAAGCCTCCGAGTCGGACACGGATGTGTTCTCCACCTCCGCGATTGGGGCTTCTAATTCTGCAACTCGCCCAGTTGTTCTCGTCGATTCGCAGGAGAACGGAATTCAACTGGTTCATGCTCTGATGGTCTGTGCTGAAGCCGTACAGCAGAATAACCTGAATCTAGCGGAGGCTCTGGTAAAGCGAATCGATTACTTAGCGGTTTCTCAAGCCGGAGCGATGAGGAAAGTCGCCACGTTCTTCGCCGAAGCATTGGCACGCCGAATCTATAGGCTCTGCCCTGAGAATCCCCTCGATCGTTCAGTGCTCGATATGCTTCAGATGCATTTCTACGAGAGCTGTCCCTATCTGAAATTCGCGCATTTCACCGCGAATCAAGCGATTCTCGAAGCCTTCGAAGGGAAGAAGCGTGTTCACGTCATCGATTTCTCGATGAACCAGGGGATGCAGTGGCCGGCTTTGATTCAAGCCCTAGCTCTACGACCGAGCGGTCCTCCTACCTTCCGACTCACCGGAATCGGCCCTCCGGCGCCGGATAACTCCGATTACCTCCAAGATGTGGGCTGGAAGCTCGCCAAATTCGCCGAAACCCTCCATGTGGAGTTCGAATACAGAGGATTTGTAGCGAACAGTTTGGCAGATCTGGACGCATCGATGCTGGAGCTCCGACCGAGCGAGGTGGAGTCGGTGGTAGTGAACTCGGTGTTCGAGCTGCATCAGCTACTGGCTCGGCCGGGGGCAATTGAGAAGGTTCTGTCGGTGGTGAAGCAGATGAAGCCGGAGATCGTGACGGTGGTGGAGCAGGAAGCGAACCACAACGGTCCGGTTTTCGTGGAACGATTCACCGAGTCACTCCATTACTACTCGACGCTGTTTGACTCGTTGGAGTGCTCCCCCAACAACCAAGACAAGATGATGTCGGAAATGTACCTTGGGAAACAAATCTGCAATGTGGTAGCTTGTGAAGGTGCCGACCGAGTGGAGCGCCACGAAACCCTGACTCAGTGGCGCACTCGGTTAACCTCCGCTGGGTTCGATCCCATCCACCTCGGCTCAAACGCATTCAAGCAAGCGAGTATCCTCCTCGCCCTGTTTGGCAGCGGCGAAGGGTACCGGGTAGAAGAGAACGAGGGATCACTAATGCTGGGATGGCACACCCGCCCCCTCATCGCCACCTCCGCCTGGAAACCCGGCAACAACCCGGTGGTCGCTCACTGA 1743 53.53 MKREHHYLHPRPEPPSVATGSNRESYLNTGKAKLWEEEVQLDGGMDELLAVLGYKVKSSDMAEVAQKLEQLEEAMCQVQDTGLSHLAFDTVHYNPSDLSTWVESMLTELHPPPPTSHLDDSSFLAPAESSTIANIDYEPQLQTSSRIFEESSSSDYDLKAITDSAIYSPRESKRLKASESDTDVFSTSAIGASNSATRPVVLVDSQENGIQLVHALMVCAEAVQQNNLNLAEALVKRIDYLAVSQAGAMRKVATFFAEALARRIYRLCPENPLDRSVLDMLQMHFYESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALIQALALRPSGPPTFRLTGIGPPAPDNSDYLQDVGWKLAKFAETLHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHQLLARPGAIEKVLSVVKQMKPEIVTVVEQEANHNGPVFVERFTESLHYYSTLFDSLECSPNNQDKMMSEMYLGKQICNVVACEGADRVERHETLTQWRTRLTSAGFDPIHLGSNAFKQASILLALFGSGEGYRVEENEGSLMLGWHTRPLIATSAWKPGNNPVVAH 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5503250 5504992 - Carg26339-RA Car15g00905 162742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00905 580 Coils Coil 54 74 - -
Car15g00905 580 ProSiteProfiles GRAS family profile. 203 571 IPR005202 -
Car15g00905 580 MobiDBLite consensus disorder prediction 1 25 - -
Car15g00905 580 Pfam Transcriptional regulator DELLA protein N terminal 46 113 IPR021914 -
Car15g00905 580 Pfam GRAS domain family 212 571 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g02213 Car-Chr4:17991063 Car15g00905 Car-Chr15:5503250 0 dispersed
Car11g00457 Car-Chr11:2522467 Car15g00905 Car-Chr15:5503250 1.94E-150 dispersed
Car15g00691 Car-Chr15:3844754 Car15g00905 Car-Chr15:5503250 0 dispersed
Car15g00905 Car-Chr15:5503250 Car07g00624 Car-Chr7:3142947 3.83E-73 dispersed
Car15g00905 Car-Chr15:5503250 Car04g02063 Car-Chr4:16797082 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4848 PF03514 GRAS 3.20E-135 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00905 K14494 - csv:101204164 1041.95