Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00913 ATGTTGGCGGCAATTTCAGCGGTGGTCGGCGAAGGGTTCATCGCCAAAGACATGACGTTTGAGAACAGGGCAGGAGCAGAGAAGCACCAAGCTGTTGCCCTCCGAACTAACGCCGATCGCTCAATATTCTATCGATGCAGCTTCAAAGGCTACCAAGACACTCTATACGCCCACTCCAACCGCCATTTCTTCCGTGAATGCCACATTTACGGAACCATCGACTTCATTTTCGGCGACGGCGCCTCTGTATTTCAAAATTGCAACATCTTCGTCAGAAAGCCGATGGAAAACCAGAAAAACACGGTGACGGCGCAGGGGAGGTCCGACCCGAATGAAAACACGGGGTTTGTGATACATAATTCCGTTGTCAGAGCGGCACCGGACCTGAAGGCGGTGGAGGGTGTGTACAAAACCTATTTGGGTAGGCCGTGGAAGGCGTATTCGAGGACGGTGGTAATGAGGAGCTTTTTGGATGGGCTAATTGAACCGGCAGGGTGGCTTCCTTGGGCCGGAGATTTCGGTCTGAAGACGGTTTATTATGGGGAGTTTAAGAACAGCGGTGGCGGGGCAAGTACAATGAGGAGGGTGCAGTGGCCGGGGTACCATGTCATGAAGACTGCGGCGGAGGCCGAGAGATTTACGGTGGAAAGTTTCCTGGAAGGAGGAGGTTGGATTCCGGGCACCGGAGTGCCATTTGCAAATGGGGTATGA 711 53.31 MLAAISAVVGEGFIAKDMTFENRAGAEKHQAVALRTNADRSIFYRCSFKGYQDTLYAHSNRHFFRECHIYGTIDFIFGDGASVFQNCNIFVRKPMENQKNTVTAQGRSDPNENTGFVIHNSVVRAAPDLKAVEGVYKTYLGRPWKAYSRTVVMRSFLDGLIEPAGWLPWAGDFGLKTVYYGEFKNSGGGASTMRRVQWPGYHVMKTAAEAERFTVESFLEGGGWIPGTGVPFANGV 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 5737801 5738511 - Carg27945-RA Car15g00913 162750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00913 236 ProSitePatterns Pectinesterase signature 2. 69 78 IPR033131 -
Car15g00913 236 Pfam Pectinesterase 4 221 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g00913 Car-Chr15:5737801 Car17g01016 Car-Chr17:8060470 8.04E-102 dispersed
Car15g00913 Car-Chr15:5737801 Car17g01015 Car-Chr17:8052657 8.64E-96 wgd
Car15g00913 Car-Chr15:5737801 Car18g00888 Car-Chr18:9777797 2.35E-99 wgd
Car15g00913 Car-Chr15:5737801 Car04g01516 Car-Chr4:8807358 9.95E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00913 - K01051 csv:101219120 422.55