Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00942 ATGGCTTCGGATCCGAAGGTTCATCTGTTCGAAGAAGTGGCAAAGCACAACAAAACCAAAGATTGTTGGCTTGTAATCTCTGGGAAGGTTTATGATGTAACTCCTTTCATGGAGGATCATCCTGGAGGCGATGAAGTATTGTTAGCAGCAACTGGAAAAGATGCTACGAACGATTTCGAAGATGTTGGGCACAGCGACTCGGCAAGAGAAATGATGGACAAATATTACATCGGAGAAATCGATCCATCAACAGTTCCTTTGAGGAAGATTTACATTCCATCACAACAAACACAGTACAATCCAGATAAGACAGCTGAGTTTGTGATTAAAATCTTGCAGATTTTGGTTCCCATATTTATTTTGGGTTTGGCATTTGCTGTTCGTCACTACACCAAGAATGAATGA 405 40.99 MASDPKVHLFEEVAKHNKTKDCWLVISGKVYDVTPFMEDHPGGDEVLLAATGKDATNDFEDVGHSDSAREMMDKYYIGEIDPSTVPLRKIYIPSQQTQYNPDKTAEFVIKILQILVPIFILGLAFAVRHYTKNE 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 6720301 6722727 - Carg26776-RA Car15g00942 162779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g00942 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Car15g00942 134 PANTHER CYTOCHROME B5 1 132 - -
Car15g00942 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 87 IPR036400 -
Car15g00942 134 SMART Cyt_b5_2 8 81 IPR001199 -
Car15g00942 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Car15g00942 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Car15g00942 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Car15g00942 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Car15g00942 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Car15g00942 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Car15g00942 134 PANTHER CYTOCHROME B5-LIKE 1 132 - -
Car15g00942 134 Gene3D - 1 86 IPR036400 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00943 Car15g00942 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g01436 Car-Chr2:9379656 Car15g00942 Car-Chr15:6720301 6.67E-56 dispersed
Car06g01070 Car-Chr6:8049560 Car15g00942 Car-Chr15:6720301 1.47E-66 dispersed
Car08g00738 Car-Chr8:4756415 Car15g00942 Car-Chr15:6720301 7.87E-40 dispersed
Car14g01692 Car-Chr14:13456992 Car15g00942 Car-Chr15:6720301 2.87E-68 dispersed
Car15g00942 Car-Chr15:6720301 Car17g00096 Car-Chr17:556509 4.57E-62 dispersed
Car14g01928 Car-Chr14:14765753 Car15g00942 Car-Chr15:6720301 1.67E-46 wgd
Car15g00942 Car-Chr15:6720301 Car02g00943 Car-Chr2:6663140 9.14E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00942 K23490 - csv:101207109 263.848