Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g00960 ATGAACAACAACTACAATAAGCTCCACTCCTCCCGCTCCGGCGACACTCCGGCCTCCAGCTTTCGTGTTTCCAATGATCACTCCGATCCCCTACCACCACCTTCACCATCCTCCTCCCGCCGCCGTATCCTCCTCATCTCCTTCCTCTCCATCTTTCTCATCACTGCCTCCGCCGTCTCGGCTGTGGTTCTCGTCCACTCTCGCATCGCCGCCTCCACCGAGTCTCATTTCCCCCACAACAAGCCCACACAAGCCATCTCCCGGGCTTGCAGCCTCACTCTCTACCCTTCTCTTTGCCTCTCCTCCCTTCTCTCCGCCCCCGGCTCTCTCTCCGCCGACGTCCACGACCTCGTCCATATCTCTCTCAACCTAACTCTCCAACATCTCACCAAAGCTCTCTATTCCACTTCACAAATCCCCATCTCCCAAATCTCCAACGACCCTCTTGCCCAATCCGCTTATGAAGACTGTATGGAGCTTCTAAACGACGCCGTTGAAGCTTTTTCCCTCTCTCTCTTTTCCACAACCGCCACCAACCACGACGTGATGACGTGGCTGAGTGCAGCGTTGACTTACCATGACACGTGTACGGATGGATTTTCTGATGTGGCTGACCCAATCAAGGATCAGATAACGGCCAAATTGAGTGATTTGTCGGAGATGATAAGTAACTCTTTAGCCATTTTTTCTGGGTTTGGTGGTGACGATTTGCCGGTGGAGAACCGCCGCCGCCGCCGGCTTATGGAGAGTGATGAACACTGGTTAGCCGAGGAAAATAATGTTGATGGGGATTTTCCCCAGTGGGTGAGTGGGAAAGATCGCCGCCTTTTGGCTGCTCCCATATCGTCAATTCAGGCGGATATCGTGGTGGCTAAGGATGGTAGTGGCAAATTCAAGACAGTGGCGGAGGCCATTGCGGCGGCTCCGTCATCCAGTGGCCGCCGGATCGTGATCTACATTAAAGCCGGAAAGTACGAAGAGGAGAATTTGAAGGTAGGAAGGAAGAAAACAAACTTGATGTTTGTGGGAGATGGGAAGGGCATAACCGTCATTTCAGGTGGTAAAAGCGTTTATGACAAAGTTACCACTTTCCGGACCGCCACCTTTGCGGGCTCTGGGACAGGACTAATTCTACGAGACATGACATTTGAGAACACGGCAGGGCCAAACAAGCACCAAGCAGTGGCACTACGTTTGAGTGCAGACCACGCTGTGGTATTTCGTTCCAACGTTATCGGTTATCAAGACACTCTCTATGTCCACTCAAATCGTCAGTTCTTTCGAGAGTGCGATATTTACGGCACGATTGACTTCATCTTTGGTAATGCTGCCGTCGTCTTCCAAAGTTGCAACATCTATGCTCGTAAGCCAATGTCAGGACAAAAGAATACCATCACAGCTCAAGACCGAAAAGACCCAAACCAAAACACCGGAATCTCTATCCATGCCTGTAAAATCATCGCCACTGGTGACCTCGAAGCCTCCAAAGGATCTTTCCCCACCTACCTCGGCCGCCCTTGGAAGTTATATTCTAGAGTCGTATACATGGTATCTTCTATGGGAGACCATATTCATCCTCGCGGTTGGCTCGAATGGCAAGGCTCTTTTGCTCTTGACACTCTTTACTATGGTGAGTATATGAATTCTGGGTCGGGCGCCGCTGTAGGACAGAGGGTTAAATGGCCAGGTTATCGAGTAATAACTTCTACTATAGAAGCCACCAAATTTACTGTCGGACAGTTTATTTATGGCTCCTCCTGGTTGCCTTCTACTGGAGTGTCGTTTTCAGCTGGATTATCTACTAACTAA 1809 50.53 MNNNYNKLHSSRSGDTPASSFRVSNDHSDPLPPPSPSSSRRRILLISFLSIFLITASAVSAVVLVHSRIAASTESHFPHNKPTQAISRACSLTLYPSLCLSSLLSAPGSLSADVHDLVHISLNLTLQHLTKALYSTSQIPISQISNDPLAQSAYEDCMELLNDAVEAFSLSLFSTTATNHDVMTWLSAALTYHDTCTDGFSDVADPIKDQITAKLSDLSEMISNSLAIFSGFGGDDLPVENRRRRRLMESDEHWLAEENNVDGDFPQWVSGKDRRLLAAPISSIQADIVVAKDGSGKFKTVAEAIAAAPSSSGRRIVIYIKAGKYEEENLKVGRKKTNLMFVGDGKGITVISGGKSVYDKVTTFRTATFAGSGTGLILRDMTFENTAGPNKHQAVALRLSADHAVVFRSNVIGYQDTLYVHSNRQFFRECDIYGTIDFIFGNAAVVFQSCNIYARKPMSGQKNTITAQDRKDPNQNTGISIHACKIIATGDLEASKGSFPTYLGRPWKLYSRVVYMVSSMGDHIHPRGWLEWQGSFALDTLYYGEYMNSGSGAAVGQRVKWPGYRVITSTIEATKFTVGQFIYGSSWLPSTGVSFSAGLSTN 602
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
15 7028201 7031426 - Carg26209-RA Car15g00960 162797
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car15g00960 602 Pfam Pectinesterase 287 584 IPR000070 GO:0030599|GO:0042545
Car15g00960 602 MobiDBLite consensus disorder prediction 1 38 - -
Car15g00960 602 ProSitePatterns Pectinesterase signature 2. 432 441 IPR033131 -
Car15g00960 602 MobiDBLite consensus disorder prediction 1 26 - -
Car15g00960 602 Pfam Plant invertase/pectin methylesterase inhibitor 85 228 IPR006501 GO:0004857
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car15g00960 Car18g01228 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g01903 Car-Chr4:11212776 Car15g00960 Car-Chr15:7028201 3.43E-131 dispersed
Car14g01074 Car-Chr14:9485745 Car15g00960 Car-Chr15:7028201 5.72E-131 dispersed
Car15g00960 Car-Chr15:7028201 Car17g01016 Car-Chr17:8060470 2.40E-168 dispersed
Car16g00869 Car-Chr16:6512627 Car15g00960 Car-Chr15:7028201 4.77E-133 dispersed
Car15g00960 Car-Chr15:7028201 Car16g00047 Car-Chr16:328292 2.42E-110 wgd
Car15g00960 Car-Chr15:7028201 Car18g01228 Car-Chr18:11816241 0 wgd
Car15g00960 Car-Chr15:7028201 Car02g00926 Car-Chr2:6557197 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g00960 - - csv:101216816 966.837