Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01027 ATGGCATTCTCCCTTAACTCATTCTTCTTCTTCTTCTTCATTTCCGTTCCGGCTTTCTTTCTCCTAGCCGCCGCCAAGCACCACCGCCACCACTGGGTCGGACCCACCGGCCACCGCCTTATCAAAGTGGACGTCAACGGCATCTCCGGCGAGTTCCTCTCCGTCCAAGCCGCCGTGGATGCAATCCCCGATTACAATACCGTCAACACCCTCATCCGAATCAGCCCTGGTTATTACGTGGAGAAGGTGGTGGTGCCGGCGACGAAGCCGTACATAACATTTGAAGGAGGGGGGAAAGAGACGACGGTGATAGAGTGGCACGACCGAGCAGGTGACCGTGGTCCCAGCGGGCAGCAGCTGCGTACTTACAGAACAGCTTCTGTCACAGTTTTTGCTAATTACTTCTCTGCCCGAAACATCAGCTTCAAGAATACGGCACCGGCGCCAATGCCCGGAATGCAAGGGTGGCAGGCGGCGGCGTTTCGTATTTCCGGTGACAAGGCCTACTTTTCCGGGTGTGGATTCTACGGCGCACAAGACACCCTCTGTGACGACGCCGGCCGCCATTACTTCAAAGAATGCTACATCGAAGGCTCCATAGACTTCATTTTTGGCAACGGGCGTTCCATGTATAAGGATTGCGAGCTGCACTCGATCGCCACCCGGTTCGGTTCCATAGCGGCCCAAGATAGAAACTTGCCTAACGAGAAGACCGGGTTCGCTTTCGTCCGATGCAAGGTGACCGGTTCTGGACCTATATACGTGGGCCGGGCTATGGGCCAGTACTCCAGAATCGTCTACGCGTATACATACTTTGATGACGTGGTGGCCCACGGTGGATGGGATGACTGGGACCACACCAGCAACAAAAACAAGACTGTATTTTTTGGAGTATACAAGTGCTGGGGCCCAGGAGCAAGTAAAGTAAAGGGAGTATCATGGGCCAAGGAATTGGAGTTTGAAGAGGCCCATCCATTTCTTGTGAAGAGTTTTGTGAATGGCAGGCACTGGATTGCACCCTCTGATGCGTAG 1032 54.07 MAFSLNSFFFFFFISVPAFFLLAAAKHHRHHWVGPTGHRLIKVDVNGISGEFLSVQAAVDAIPDYNTVNTLIRISPGYYVEKVVVPATKPYITFEGGGKETTVIEWHDRAGDRGPSGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMQGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIATRFGSIAAQDRNLPNEKTGFAFVRCKVTGSGPIYVGRAMGQYSRIVYAYTYFDDVVAHGGWDDWDHTSNKNKTVFFGVYKCWGPGASKVKGVSWAKELEFEEAHPFLVKSFVNGRHWIAPSDA 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8018790 8021533 - Carg23203-RA Car15g01027 162864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01027 343 Pfam Pectinesterase 49 334 IPR000070 GO:0030599|GO:0042545
Car15g01027 343 ProSitePatterns Pectinesterase signature 2. 196 205 IPR033131 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car10g00608 Car-Chr10:3096296 Car15g01027 Car-Chr15:8018790 5.26E-107 dispersed
Car11g00536 Car-Chr11:2899346 Car15g01027 Car-Chr15:8018790 1.30E-106 dispersed
Car12g00436 Car-Chr12:2773922 Car15g01027 Car-Chr15:8018790 7.37E-85 dispersed
Car15g01027 Car-Chr15:8018790 Car16g00445 Car-Chr16:2820554 1.00E-87 dispersed
Car15g01027 Car-Chr15:8018790 Car02g01302 Car-Chr2:8667745 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01027 - - cmo:103483059 649.047