Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01061 ATGGAGGGAAGGGACGGTGGTGCAAGTAGTGGGGTTACTGTAGTTGGATCAGATGCTCCGTCCAAGTACCAAATAGCACCCAGGACCTCCGATAGCCCACCGCAGAGCGGTGGATCAACGCTGCCACCGGCGACTCAACCAACTTCCACGCCGTCGGCCTCGGCGCAGGTACCTGCGCAGCCTACGGCACCCACGGGGGCCTCCTCTGTTCCGGGAAAGAAGAAAAGAGGGAGGCCGAGAAAATATGGACCCGATGGCTCTGTTAATATGGCTCTGTCTCCCAAGCCGATATCGTCGTCGGTGCCGCCGCCGGTGATTGACTTCTCGGCGGAGAAGAGGGGGAAAGTCCGGCCGGCGAGTGGTGTGAACAAAACCAAATTCGAAGTGGATAATTTAGGCGATTGGGTGGTTCCATGTTCTGTTGGTGCAAATTTTACGCCTCATATCATCACTGTCGATGCGGGCGAGGATGTTACGATGAAGATAATATCGTTTTCTCAACAAGGGCCTCGAGCGATATGCGTTTTATCTGCTAATGGTGTGATCTCGAGTGTCACTCTTCGTCAGCCTGATTCGTCTGGAGGAACATTAACATATGAGGGTCGATTTGAAATACTATCCTTATCTGGCTCGTTCATGCCGAGTGACAATGGAGGAACTAGAAGTAGATCGGGTGGAATGAGCGTTTCCTTAGCAAGTCCAGACGGGCGGGTCGTAGGCGGTGGAGTTGCTGGTCTATTAGTAGCTGCAAGTCCTGTTCAGGTTGTAGTAGGGAGTTTTCTTTCTGGAAACCAACATGAGCAGAAACCTAAAAAGCCAAAACAAGATACTAATTCAACTGCTCCGCCAACTGCTGCCATTCCAATATCTTGCGTCGACCCTAAAGCGAACCTCTCGCCGTCCAGTCCCTTTCGTGGCGATAACTGGTCGACGCTGCCAACCGATTCGAGGAATAATAAGCCAACTGATATCAGTGTATCCCTACCCAGTGCT 993 52.06 MEGRDGGASSGVTVVGSDAPSKYQIAPRTSDSPPQSGGSTLPPATQPTSTPSASAQVPAQPTAPTGASSVPGKKKRGRPRKYGPDGSVNMALSPKPISSSVPPPVIDFSAEKRGKVRPASGVNKTKFEVDNLGDWVVPCSVGANFTPHIITVDAGEDVTMKIISFSQQGPRAICVLSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDNGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLSGNQHEQKPKKPKQDTNSTAPPTAAIPISCVDPKANLSPSSPFRGDNWSTLPTDSRNNKPTDISVSLPSA 331
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
15 8352036 8354089 - Carg16682-RA Car15g01061 162898
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car15g01061 331 MobiDBLite consensus disorder prediction 262 331 - -
Car15g01061 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 147 260 IPR005175 -
Car15g01061 331 MobiDBLite consensus disorder prediction 295 331 - -
Car15g01061 331 ProSiteProfiles PPC domain profile profile. 142 283 IPR005175 -
Car15g01061 331 MobiDBLite consensus disorder prediction 1 103 - -
Car15g01061 331 MobiDBLite consensus disorder prediction 23 67 - -
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g01061 Car-Chr15:8352036 Car01g01608 Car-Chr1:13213409 6.06E-67 dispersed
Car14g01784 Car-Chr14:13966301 Car15g01061 Car-Chr15:8352036 3.51E-102 wgd
Car15g01061 Car-Chr15:8352036 Car16g00986 Car-Chr16:8368895 8.31E-125 wgd
Car15g01061 Car-Chr15:8352036 Car18g01102 Car-Chr18:11045895 2.80E-85 wgd
Car15g01061 Car-Chr15:8352036 Car02g01272 Car-Chr2:8526097 1.06E-160 wgd
Car15g01061 Car-Chr15:8352036 Car06g00668 Car-Chr6:3979908 4.53E-112 wgd
Car15g01061 Car-Chr15:8352036 Car06g00971 Car-Chr6:7448183 9.87E-96 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01061 - - csv:101210208 533.487