Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01063 ATGGATGCTCACTCCCTTCCTCCTCCCTTCCACACCCGAGATTTCCATCTCCAGACTCCGTTTCACCATAACAACAACAACAACCACAACAACAACAATTCCGAAGAGGAACATAGTGCCACCACCAGCCGTCTCAAGCGTGATCGCGACGATGACCATCACCCCAACAACTCCGCCCCCAACAGCGGTGGAGATCCCGACGGAGAAATCACGCGTCGCCCTAGAGGCAGACCTGCCGGATCCAAAAACAAACCCAAACCCCCTATTATCATTACTCGTGACAGTGCCAACGCCCTTCGGACCCATGTCATCGAGGTCACCGATGGCTGCGACATCGTCGACAGTGTTGCTACCTTCGCTCGCCGCCGACAGCGTGGCGTTTGTATCATGAGCGGTACCGGCACCGTTACCAACGTCACTCTCCGCCAACCCGCCTCCCCCGGTGCAATTGTCAACTTACACGGTCGTTTCGAGATCTTGTCCCTTGCCGGGTCTTTCCTCCCTCCTCCGGCTCCTCCTGCCGCTACCACCTTAACCATTTACCTCGCCGGCGGTCAGGGCCAAGTCGTCGGCGGTAGCGTCGTTGGTACTTTAATCGCTTCCGGCCCTGTCGTCATCATGGCTGCCTCGTTTAGTAACGCCGCTTATGAACGGCTCCCGTTGGAGGAGGACGACCAGCCGCCACTTCCGTCGATGCAAGGCGGCGGCGGAATTGGGTCTCCCGATGAAATTGGACAGCCCCAACAACAGCAGCAACTCGTCGGCGACGGAAATGGGCCGTTGTTTCAAGGTTTGCCTCCGAATCTGCTAAATTCAATTCAAATGCCACCATCGGAAGCCGCTTATTGGGCAAATTCCCGTCCACCGTACTAA 873 56.82 MDAHSLPPPFHTRDFHLQTPFHHNNNNNHNNNNSEEEHSATTSRLKRDRDDDHHPNNSAPNSGGDPDGEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGCDIVDSVATFARRRQRGVCIMSGTGTVTNVTLRQPASPGAIVNLHGRFEILSLAGSFLPPPAPPAATTLTIYLAGGQGQVVGGSVVGTLIASGPVVIMAASFSNAAYERLPLEEDDQPPLPSMQGGGGIGSPDEIGQPQQQQQLVGDGNGPLFQGLPPNLLNSIQMPPSEAAYWANSRPPY 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8368800 8369672 + Carg16680-RA Car15g01063 162900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01063 290 MobiDBLite consensus disorder prediction 19 38 - -
Car15g01063 290 MobiDBLite consensus disorder prediction 1 91 - -
Car15g01063 290 MobiDBLite consensus disorder prediction 222 270 - -
Car15g01063 290 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Car15g01063 290 ProSiteProfiles PPC domain profile profile. 96 232 IPR005175 -
Car15g01063 290 MobiDBLite consensus disorder prediction 39 56 - -
Car15g01063 290 MobiDBLite consensus disorder prediction 243 257 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car06g00967 Car15g01063 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00833 Car-Chr8:5568596 Car15g01063 Car-Chr15:8368800 3.63E-81 dispersed
Car15g01063 Car-Chr15:8368800 Car17g00027 Car-Chr17:118146 3.28E-86 dispersed
Car15g01063 Car-Chr15:8368800 Car02g01275 Car-Chr2:8548085 2.25E-150 wgd
Car15g01063 Car-Chr15:8368800 Car06g00967 Car-Chr6:7419418 1.40E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01063 - - csv:101209716 453.751