Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01102 ATGGATGGGAGGGAAGGCATGGCATTGTCTGGTGGCTCTGCTTCTTATTACATACATAGAGGAGGAGGGCTTGGTGGGTCTGGATCAGGGGTGCCTACGGCTGGATCCCATGCCTCCCCTGTGTTCCGGCCGATGGCTAACCAGGGTGTTCTGTCTCACTCAAATCTCAGAGGCAATTCCGTTGGATCAACATATACTGTTGAGCCATCTCATTCAAATTATCTTCGTGGGATGAGTATCAATGCCTCAGCTGGAGTGAACTCTGGTGAACCTGTAAAGAGGAAGAGAGGGAGGCCACGGAAATATGCTCCAGATGGGCAGGTCTCATTGGGTCTGTCTCCCATGTCTGTTGGTTCTAAGCTCTCACCCGGCATGAGTTCGTCGACCCCCAGACGAAGACGAGGGCGGCCACCTGGTTCTGGAAGGAAACAACAATTAGCTCAACTTGCAAAAGTATTGTCGTTTGCACAGCAGAGGCCAAGGGCTGTTTGCATCTTGTCTGGAAATGGTACCGTTTCTTCCGTAACGCTACGTCAACCTGCATCTACTGGCGTGAGCGTCACATATGAGGGTCATTTCCAGATATTGTGCTTGTCTGGTTCTTACTTGGTGGCTGAAGATGGCGGTCCTCGAAGTAGGACGGGCGGTATTAGTGTTTCCCTTTCTAGTCCTGATGGTCATGTCGTCGGCGGTGGCGTTGCCGTTCTTATGGCAGCTGGCCCCGTTCAGGTAGTTGTATGTAGTTTTGTTTATGGTGCAAAGATAAAAAACAAGCAGGTCGCTGGTCCGAAAAGCAACGACGATTCCAGAAATGAGCACCGGGATAATATGGTTTCGCCTACGAGTGCCCCATCTGCCCACACCTACAACCCGTCTCCGATTGGTGGTTGGCCCGGTTCCCGTTCGATTGATGTGAGAAACTCCCATACTGGAATTGACTTGACGCGAGGATGA 954 51.47 MDGREGMALSGGSASYYIHRGGGLGGSGSGVPTAGSHASPVFRPMANQGVLSHSNLRGNSVGSTYTVEPSHSNYLRGMSINASAGVNSGEPVKRKRGRPRKYAPDGQVSLGLSPMSVGSKLSPGMSSSTPRRRRGRPPGSGRKQQLAQLAKVLSFAQQRPRAVCILSGNGTVSSVTLRQPASTGVSVTYEGHFQILCLSGSYLVAEDGGPRSRTGGISVSLSSPDGHVVGGGVAVLMAAGPVQVVVCSFVYGAKIKNKQVAGPKSNDDSRNEHRDNMVSPTSAPSAHTYNPSPIGGWPGSRSIDVRNSHTGIDLTRG 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8671648 8676541 - Carg16640-RA Car15g01102 162939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01102 317 MobiDBLite consensus disorder prediction 82 146 - -
Car15g01102 317 MobiDBLite consensus disorder prediction 112 129 - -
Car15g01102 317 MobiDBLite consensus disorder prediction 260 317 - -
Car15g01102 317 MobiDBLite consensus disorder prediction 303 317 - -
Car15g01102 317 Pfam Plants and Prokaryotes Conserved (PCC) domain 150 250 IPR005175 -
Car15g01102 317 ProSiteProfiles PPC domain profile profile. 132 273 IPR005175 -
Car15g01102 317 MobiDBLite consensus disorder prediction 261 275 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00752 Car15g01102 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g01102 Car-Chr15:8671648 Car01g01608 Car-Chr1:13213409 5.70E-56 dispersed
Car15g01102 Car-Chr15:8671648 Car17g00389 Car-Chr17:2588607 2.24E-74 wgd
Car15g01102 Car-Chr15:8671648 Car02g01225 Car-Chr2:8297950 0 wgd
Car15g01102 Car-Chr15:8671648 Car08g00794 Car-Chr8:5327427 3.92E-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01102 - - csv:101219973 534.643