Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01122 ATGGCTGGAGAAGACAAATCAAACGAGATGGTTGTTGGTGGATTTTATTACAATTCCAACCAGATCCAACCCGGGTTTGGATCCAGCACCGAACCGGCGGAGATATTCAATTTGCAAGTGAACAACGAGTCCGGCGGCGGCGGCGGCGGTGGTGATGATGAGTTTCATCATCACTTGATGGTGGTTGGGCCTTGGGGGACGGCGGCGGCGGCGGCGGCGGATTCGTCGTTGAGATGTGTGTTTCCATGTGAAGCAAACGAGAGACCAAGTCATGGCCTTTCTTTGTCTCTTAGTTCCACTAATCCTTCTTCTATTGGCTTACAATCCTTTGAATTAAGAACCCAACAATCATCTTCGGCCATTTTTCAGCTTCGAAACTCCAAATTCTTGGCCCCAACTCAAGAGCTTCTTTATGAGTTTTGTAGCCTTGAAATCACCAATGATATGAACAATAGGCACCAAAACCAACCCATTTCTTCTACCAACTCCTCTCTTCAATCACTTGATTTCATGGAATTGCAAAAGAGAAAAACCAAGCTTTTTTCCTTGCTTGAAGAGGTTGAAAGAAGGTATAGGCATTATTGCAAGCAAATGAAGGCGGTGGTGGCGTCGTTCGAAGCGGTGGCCGGGAATGGGGCGGCGAGGGTGTACTCGGCGTTGGCATCGAAAGCGATGTCCAAGCATTTTAGGAGCCTAAAAGATGGAATTGTGGGGCAAATTCAAGCCACAAAAAAGGCAATGGGAGAAAAGGATCCAATTGCACCTGGTACCACAAGAGGAGAAACGCCAAGGCTTAGAGTGATTGATCAGGCCTTAAGGCAACAAAGAGCTTTCCATCAAATCAGTGTCATGGAAAGCCATCCTTGGCGCCCTCAACGTGGCCTCCCCGAGCGTTCTGTCTCGGTTCTTCGTGCTTGGCTTTTCGAACACTTTCTTCACCCGTACCCTAGCGATGTGTCGAATTGGTTCATTAATGCGAGGGTGAGGCTGTGGAAGCCAATGGTGGAGGAGATGTATTTAGAGGAAACAAAGGAACAAGTAGAAGAAATTGATAACACCAACTTCAACAACATGAACAACAATGGCAACAACTCTTTCGATGGGATGATGGATTTCGATGACGAGATCGACGGTCAACGATCGATCCCGACGAGGGTGGAGGATCGGAAGCCGACGTCAGACCAACTCTTAAGAATAGATTCGGAAGGTCTCTCTTCGATCATCTCTAATAACTCGGAGAAGAATGATCCAAGAGCCATGAAAGCCATGCAAAACCATCAAGGGCAACACGTCCACAACAGCCATAACCATAACTTTGGGCGCATCGCTACTGATGCATTCGGCATGGTGGAGCTCGACTTCTCGTCCTACAACCACGATAGCGGCGGAGTTTCCTCGTACCTCAACAACAACAACAATCAACATTTCAACAACGGGAGTACTAGTAGTGTGTCGTTGACATTGGGGTTACAACAACATGCAGCAGGCGGGAGGAGCGTCAGCGAAGGTGTTAGCATCGCCTTCTCGCCGGCGGCGGCCGCAGCAGCGACTCAAAGCTCCATTTTTTTCACAAGAGATCATATCGAAGAATGCCAACCAGTTCAATATTCTCTTTTAGATGGAGAAACGACTCAGAATCTTCCTTATAGAAACTTGATGGGTGCTCAATTGCTTCATGATTTGGCCGGATAA 1692 47.75 MAGEDKSNEMVVGGFYYNSNQIQPGFGSSTEPAEIFNLQVNNESGGGGGGGDDEFHHHLMVVGPWGTAAAAAADSSLRCVFPCEANERPSHGLSLSLSSTNPSSIGLQSFELRTQQSSSAIFQLRNSKFLAPTQELLYEFCSLEITNDMNNRHQNQPISSTNSSLQSLDFMELQKRKTKLFSLLEEVERRYRHYCKQMKAVVASFEAVAGNGAARVYSALASKAMSKHFRSLKDGIVGQIQATKKAMGEKDPIAPGTTRGETPRLRVIDQALRQQRAFHQISVMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVSNWFINARVRLWKPMVEEMYLEETKEQVEEIDNTNFNNMNNNGNNSFDGMMDFDDEIDGQRSIPTRVEDRKPTSDQLLRIDSEGLSSIISNNSEKNDPRAMKAMQNHQGQHVHNSHNHNFGRIATDAFGMVELDFSSYNHDSGGVSSYLNNNNNQHFNNGSTSSVSLTLGLQQHAAGGRSVSEGVSIAFSPAAAAAATQSSIFFTRDHIEECQPVQYSLLDGETTQNLPYRNLMGAQLLHDLAG 563
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8861237 8863457 + Carg16620-RA Car15g01122 162959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01122 563 Pfam Associated with HOX 124 236 IPR006563 -
Car15g01122 563 Coils Coil 170 190 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01199 Car15g01122 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g01122 Car-Chr15:8861237 Car20g00987 Car-Chr20:11517710 1.37E-79 dispersed
Car15g01122 Car-Chr15:8861237 Car02g01199 Car-Chr2:8154919 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01122 - - csv:101215049 793.882