Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01125 ATGGCGACGGGGATCTCGGCCGTTGCAACCGCGGCGCCGTACCGGAGATTAATTCAACGACCGGCGAAAGCTCCACCTCCGGCGAACCGTGTTCCATGGCGGTGCTTTGCAAAACAGAGCACGAGAAGATTGTCGACGGTGAAGAAGAAAAGTGGCGTGAGTGAAGTTGAAATAGTTAAGGATTTGAAGGTAATCGTGGAGGAGAAAATGGTGAGGAAGAAAGCGGAAAGAGATGCTTATCTTGTCGCTGCAATTGTGTCGAGCTTCGGGATCACGTCCATGGCCGCCATCGCTGTCTATTACAGATTCTCCTGGCAACTCAAGGGCGGAGATTTTCCTGTTTTGGAAATGGTTGGTACTTTCGCACTATCGGTTGGAGCTGCGGTGGGGATGGAATTTTGGGCGAGATGGGCACATAAACAGCTGTGGCATGATTCGCTATGGAATATGCACAAGTCTCATCATAGGGCGAGAAATGGACCGTTTGAATTGAACGATGTGTTCGCAATCATCAACGCGGTGCCTGCCATTGCTCTTCTTTCTTTCGGCTTCTTCCATCAGGGCTTCGTCCCCGGTCTATGTTTTGGTGCGGGTTTGGGAATTACAGTGTTTGGAATGGCCTACATGTTCGTCCACGATGGCCTCGTGCACCGTCGTTTCCCTGTGGGTCCCATAGCTGCTGTCCCCTACTTACGACGTGTCGCTGCTGCCCATCATATACATCATACGGACAAATTCGACGGCGTCCCGTACGGGTTGTTTTTAGGACCCAAGGAACTGGAAGACGTGGATGGCGAGGAAGAGCTGCAGAAAGAAATTAAAAAGAGAAGCAAAGTTTACAGAAATTAA 849 50.53 MATGISAVATAAPYRRLIQRPAKAPPPANRVPWRCFAKQSTRRLSTVKKKSGVSEVEIVKDLKVIVEEKMVRKKAERDAYLVAAIVSSFGITSMAAIAVYYRFSWQLKGGDFPVLEMVGTFALSVGAAVGMEFWARWAHKQLWHDSLWNMHKSHHRARNGPFELNDVFAIINAVPAIALLSFGFFHQGFVPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIAAVPYLRRVAAAHHIHHTDKFDGVPYGLFLGPKELEDVDGEEELQKEIKKRSKVYRN 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8874636 8876871 - Carg16617-RA Car15g01125 162962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01125 282 Pfam Fatty acid hydroxylase 127 254 IPR006694 GO:0005506|GO:0008610|GO:0016491
Car15g01125 282 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 10 278 IPR045019 GO:0016491
Car15g01125 282 PANTHER HYDROXYLASE, PUTATIVE, EXPRESSED-RELATED 10 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g01125 Car-Chr15:8874636 Car16g00091 Car-Chr16:561400 2.02E-127 dispersed
Car15g01125 Car-Chr15:8874636 Car18g01178 Car-Chr18:11471620 4.41E-124 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01125 K15746 - csv:101214325 440.654