Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01126 ATGGCTACTAAAGAGTCCAGCTCTGCGGCTGCCACTGAGGGGAAGATTAAAGGGGTTCTTACCCATGGCGGCCGATATGTTCAGTATAATGTTTATGGTAACTTGTTTGAGGTTTCTGCTAAGTATGTTCCTCCTTTGCGACCCATTGGTAGAGGTGCTTATGGTCTTGTTTGTGCTGCTGTAAATTCTGAGACACATGAAGAGGTTGCCATCAAGAAAATTGGAAATGCTTTTGATAACATAATTGATGCCAAGAGGACATTGAGAGAAATTAAGCTTCTTTGCCACATGGAACACGAAAATATTATAGCCATCAGAGACATCATTCGGCCACCAAAAAGAGAGGTTTTTAATGATGTTTATATCGTTTACGAATTGATGGACACTGATCTTCATCAAATAATTCGTTCCGACCAATCACTGACCGACGATCATTGCCAGTACTTTTTGTATCAGTTATTGCGTGGGCTGAAGTATGTACATTCAGCCAAGGTCCTGCACCGTGATCTCAAGCCAAGCAACCTGCTTCTGAATGCAAATTGCGACCTTAAAATTGGCGATTTTGGATTAGCAAGAACGACTTCTGAAACCGACTTCATGACTGAATATGTGGTTACTCGTTGGTACCGAGCACCGGAATTGCTGCTCAATTGTTCGGAGTACACTGCTGCTATCGATGTTTGGTCTGTCGGATGCATTCTTGGTGAGATCATGACCAGAGAACCTCTCTTCCCTGGAAAAGATTATGTTCATCAACTCAGACTTATAACTGAGCTACTAGGATCACCGGATGATGCCAGCCTAGGATTTCTCCGAAGCGATAATGCTCGAAGATACGTCAAGCAGCTTCCACAGTACAGGAAACAACAATTCTCAGCTAGATTTCCCAACATGTCTCCAGCTGCTCTTGATCTTCTAGAAAAAATGCTCGTATTCGATCCAAACAAACGCATTACAGTGGAGGAGGCACTTTGTCATCCATACTTGCAATCTCTTCACGACATCAACGACGAGCCAGTCTGTGTCAGGCCCTTCAGTTTCGATTTCGAGCAACCGTCGTGCACTGAAGAGCATATTAAAGAACTCATCTGGAAAGAATCCGTCCGGTTCAACCCCGACGAATCAGGCAGAAGGACGACTCTTTGCGTCTAA 1152 44.01 MATKESSSAAATEGKIKGVLTHGGRYVQYNVYGNLFEVSAKYVPPLRPIGRGAYGLVCAAVNSETHEEVAIKKIGNAFDNIIDAKRTLREIKLLCHMEHENIIAIRDIIRPPKREVFNDVYIVYELMDTDLHQIIRSDQSLTDDHCQYFLYQLLRGLKYVHSAKVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELLGSPDDASLGFLRSDNARRYVKQLPQYRKQQFSARFPNMSPAALDLLEKMLVFDPNKRITVEEALCHPYLQSLHDINDEPVCVRPFSFDFEQPSCTEEHIKELIWKESVRFNPDESGRRTTLCV 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8878926 8883868 - Carg16616-RA Car15g01126 162963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01126 383 Gene3D Phosphorylase Kinase; domain 1 26 366 - -
Car15g01126 383 ProSitePatterns MAP kinase signature. 78 181 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car15g01126 383 ProSiteProfiles Protein kinase domain profile. 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g01126 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11-RELATED 18 374 - -
Car15g01126 383 SMART serkin_6 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g01126 383 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 374 - -
Car15g01126 383 ProSitePatterns Protein kinases ATP-binding region signature. 49 73 IPR017441 GO:0005524
Car15g01126 383 SUPERFAMILY Protein kinase-like (PK-like) 46 337 IPR011009 -
Car15g01126 383 Pfam Protein kinase domain 47 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g01126 383 CDD STKc_TEY_MAPK 36 372 - -
Car15g01126 383 Gene3D Transferase(Phosphotransferase) domain 1 127 356 - -
Car15g01126 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01197 Car15g01126 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00504 Car-Chr1:2963669 Car15g01126 Car-Chr15:8878926 3.52E-61 dispersed
Car05g00374 Car-Chr5:2136289 Car15g01126 Car-Chr15:8878926 0 dispersed
Car12g00083 Car-Chr12:366900 Car15g01126 Car-Chr15:8878926 0 dispersed
Car15g01126 Car-Chr15:8878926 Car08g01053 Car-Chr8:7204705 2.71E-117 dispersed
Car15g01126 Car-Chr15:8878926 Car17g00415 Car-Chr17:2757354 0 wgd
Car15g01126 Car-Chr15:8878926 Car02g01197 Car-Chr2:8146811 0 wgd
Car15g01126 Car-Chr15:8878926 Car08g00773 Car-Chr8:5057199 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89406 PF00069 Pkinase 4.30E-71 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01126 - - csv:101214254 763.066