Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01139 TACTCAATCCCCATTTTCCCTCTGCGTGTAACAGACGAGCGCCATAGCTACACCAAGCCCAAGCTTCTTCTTCTTCAGAGCTCTAATGGCTGCTTAGAAACGTCTGGTTCTGTGTTCTACAGACCTCTAATGGAAGCTCTGTGGATTATCAGCTTCGTTTTGGTTCTGGGGTTGGTTTTTTCCCCAAGTAATGGCGACCCAGTTCAAGATAAGCGAGCTTTGCTTGATTTTGTCAAGAAGCTTCCTCACTCTCGCTCTCTTAATTGGAATGTGACTTCTCCGGTTTGCCATTACTGGACTGGTATAACTTGCAGTGATGATGAATCTCGTGTTATAGCCGTTCGATTGCCCGGAGTTGGCTTCCACGGCCCGATTCCGGCGAACACTCTCAGCCGGCTCACGGGGCTGCAAATTTTGAGTCTCAGATCCAATCGTATAACAGGGGATTTCCCTTCGGATTTCTCTAATCTTAGTAACTTGTCTTATCTTTATCTTCAGTTCAATAACTTCTCTGGGCCATTGCCTTCAAACTTCTCTGTCTGGAAGAATCTCACCTTTGTGAACCTCTCTAACAATGGCTTCAATGGCAGCATACCCTTTTCACTTTCTAATATGACAGAGCTTACTGGTTTGAATTTGGCAAACAACTCTCTCTCAGGGGAAATCCCTGACCTCCAAATGCCCAAATTGCAGATTCTGAATTTATCCAACAACAATTTGAGTGGGAGTTTGCCTAAATCTTTACAGAGATTTCCAAGTTCTTCATTTCTAGGCAATAACATATCCTTTGAAAGTTCTTCACCTAACAATCCTCCCGTGCCACCAACGTTGCTCGTGTCGAATGATAAGCCGAAGAATTCCAAAGGGCTTAGAGAAGCAGCATTGTTAGGAATCATAATTGCTGGTGGTCTTTTGGGGCTTCTGGCTTTTGGCTTTCTAATACTTGTTTGCTTCTCGAGAAGGAAGAGTGAGGACGACGAGTATTCCGGGGATCGGCAGAAAGGTCGAATGTCGCCGGAGAAGGTGATATCGAGGACTCAAGATGCAAATAATAGATTGGTTTTCTTTGAGGGCTGCCATTATGCTTTTGATTTGGAGGATTTATTGAGGGCTTCTGCTGAGGTTTTGGGGAAGGGAACTTTTGGGACTGCTTATAAAGCAATTCTGGAGGATGCTACTACTGTTGTTGTTAAGAGGTTGAAGGACGTTAACGCTGGGAAGCGCGATTTCGAGCAGCAAATGGAGATTGTTGGCGGTATCAGGCATGAGAATGTGGTTGAGTTGAAGGCTTACTATTATTCCAAAGATGAGAAGCTGATGGTTTATGATTTCTTTAGTCAGGGAAGCGTCTCGGCTATGTTGCACGGTAAACGTGGAGAGGAAAAGACCCCATTAGATTGGGACAGTAGACTGAGAATTGCAGTAGGTGCAGCACGAGGAATCGCTCGTGTCCATGCCGAAAACGGAGGGAAGCTCGTCCATGGAAATGTAAAATCCTCGAACATCTTTCTGAACTCTCGACAGTATGGATGTGTGTCTGATCTTGGACTAGCAACCATAACAAGCTCGCTCGCTCCACCTATATCCCGTGCTGCTGGTTACCGAGCCCCGGAAGTGACAGACACCCGCAAGGCCACACAGGCATCAGATGTTTTCAGCTTCGGCGTTGTGCTTCTCGAGCTTCTAACCGGAAAGTCCCCGATACACGCCACAGGCGGCGAAGAAATCGTACACTTGGTTAGATGGGTTCATTCAGTTGTCCGTGAGGAGTGGACAGCTGAGGTATTTGATGTAGAGCTGATGAGGTATCCCAACATAGAGGAAGAAATGGTTGAAATGTTACAAATAGCCTTATCATGTGTGACCAGGATACCAGATCAGAGACCGAAAATGTCGGAAATCGTGACGATGATCGAAAGCGTTCGACCAATGGAAGCAGAGAATCGACGTTCTTCCACCACTCGATCTGAAAGTTCAATGCCGCCTCCGCCGCCGCCACAAGCTGTCGTGACAGAGAATTCAACCTCTCAGTGA 2034 46.41 YSIPIFPLRVTDERHSYTKPKLLLLQSSNGCLETSGSVFYRPLMEALWIISFVLVLGLVFSPSNGDPVQDKRALLDFVKKLPHSRSLNWNVTSPVCHYWTGITCSDDESRVIAVRLPGVGFHGPIPANTLSRLTGLQILSLRSNRITGDFPSDFSNLSNLSYLYLQFNNFSGPLPSNFSVWKNLTFVNLSNNGFNGSIPFSLSNMTELTGLNLANNSLSGEIPDLQMPKLQILNLSNNNLSGSLPKSLQRFPSSSFLGNNISFESSSPNNPPVPPTLLVSNDKPKNSKGLREAALLGIIIAGGLLGLLAFGFLILVCFSRRKSEDDEYSGDRQKGRMSPEKVISRTQDANNRLVFFEGCHYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKDVNAGKRDFEQQMEIVGGIRHENVVELKAYYYSKDEKLMVYDFFSQGSVSAMLHGKRGEEKTPLDWDSRLRIAVGAARGIARVHAENGGKLVHGNVKSSNIFLNSRQYGCVSDLGLATITSSLAPPISRAAGYRAPEVTDTRKATQASDVFSFGVVLLELLTGKSPIHATGGEEIVHLVRWVHSVVREEWTAEVFDVELMRYPNIEEEMVEMLQIALSCVTRIPDQRPKMSEIVTMIESVRPMEAENRRSSTTRSESSMPPPPPPQAVVTENSTSQ 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 8984359 8990228 + Carg21263-RA Car15g01139 162976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01139 677 Pfam Leucine Rich Repeat 229 250 IPR001611 GO:0005515
Car15g01139 677 Pfam Leucine rich repeat 125 170 IPR001611 GO:0005515
Car15g01139 677 ProSiteProfiles Protein kinase domain profile. 370 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g01139 677 Pfam Leucine rich repeat N-terminal domain 69 105 IPR013210 -
Car15g01139 677 ProSitePatterns Protein kinases ATP-binding region signature. 376 398 IPR017441 GO:0005524
Car15g01139 677 Pfam Protein tyrosine and serine/threonine kinase 374 637 IPR001245 GO:0004672|GO:0006468
Car15g01139 677 MobiDBLite consensus disorder prediction 640 677 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g01181 Car15g01139 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car15g01139 Car-Chr15:8984359 Car16g00071 Car-Chr16:459309 0 dispersed
Car15g01139 Car-Chr15:8984359 Car18g01209 Car-Chr18:11665514 0 wgd
Car15g01139 Car-Chr15:8984359 Car02g01181 Car-Chr2:8039599 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89407 PF07714 PK_Tyr_Ser-Thr 5.40E-34 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01139 - - cpep:111808460 1144.03