Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01164 ATGGCTTGCAATGGAGGAGATTCGTATACGCAATCTTGTGTTTCGACTCAAGGTAGTGGAAGAAATGATCTGTACACGGAGCTATGGAGAGCTTGTGCAGGTCCACTGGTTGATGTACCTCGCGTTGATGAGAGAGTCTTCTATTTCCCTCAGGGGCATATGGAACAATTAGAGGCATCGACGAATCTGGAGCTGAATAAGAGAATTCCTCTGTGTAATCTTTCCTCGAAGATTCTCTGTCGTGTAATTCATATTGAGCTGCTGGCAGATCATGAATCGGATGAGGTTTATGCACAAATAACTTTGATGCCGGAATCAAATCAAAATGAGCCTAACAGTCTAGATCCATGTCCTCCTGAACCAGCTAGACCAGTTGTTCATTCGTTCTGCAAGGTTTTAACTGCTTCTGATACCAGCACTCATGGTGGGTTTTCTGTCCTCCGAAAACATGCTACTGAGTGCCTACCTCCTTTGGACATGACTCAGGCTACCCCAACTCAGGATCTGGTAGCCAAGGATCTTCATGGATACGAGTGGCGATTCAAGCATATTTTCAGAGACAATGGAGAGTTGCATGTTGGGGTGAGGCGCCGTGCTCGACAGCAGAGCAGCATGCCATCATCTGTGATATCAAGCCAGAGCATGCACCTAGGAGTGCTAGCAACTGCGTCTCATGCTGTTACAACTCAAACCCGCTTTGTAGTCTATTATAAACCTAGGACTTGTCAGTTCATAATAAGTCTGAATAAATACTTGGAAGCAGTCAATAACAAATTTTCTGTTGGCATGAGATTCAACATGAGTTTTGAGGGAGAGGATTCTCCGGAGAGAAGGTTTTCAGGAACTATAATTGGAGCTACAGATATTTCACCTCATTGGCCTAATTCAAGTTGGAGATCACTAAGAGTTCAATGGGATGAACAAACATCTATTCTAAGACCCGACAGGGTATCGCCTTGGGATATAGAACCACTCACGTCTTCAGCAGTCACAGGTCTGTCTCAACCGATTTCAAAAAACAAAAGGCCTCGACAATCAACTCCAGCTCATGGTGTGACGGTTTCTTTCTGCTCTCTGTTGTCTTTTATCTGGTCTCTTTTCCTTATAGACATATGTGCAAGTCACTGGATCAGTCGGTCCAATTTGTATTCCAGCGTCTATTTTATCCTTGATGGTGCTGATCTGCCTAAGCCAGCACTTTGGGATTCTGGATTGGCAGAGTCACATGATGGTAAACAGTCCAGTAATGCAGCTGAAAGCAGAAAAGGTGAAAATAATGAATTGTGTCACCACAGAGAGACAGATGCTATCAGCAACAGGACATGTGTATCAAGAATACAGGCTGATGGGACCTGGCTATCTTCTACCCAATCCAATAGTCATAAACACCCAGTAAATGACATGGCCCAGGATTATAAAACTGTCCCTGGCTGTGGTTGGTCTTTTCTGTCAGGACCTTCAACCTCTCATTTGGTTAAGTTAAGTGATGAACAAATACTTGATTCCACTGAAAATGGGAGGAAAGGCGAAACAGTAGCTAGTTGTAGATTGTTTGGTATTGATCTCAATCATTTGGCTAAACTTCCTACTGAGAAAGCATCTTATCAACCAAGCAGCGTGTCTAGTGACACAGATGGGCGCAGCAGTACCTTGTCAGTAGCTCAGTCCGATCCAAAATCTGACAACTTGGAGGTTTCTGTAGAAAGAAAATCAGAACCATTACAAGCATCTCTGAAGGAGACTCAAAGCAATCAAAGTAGCTCAGCTAACACTAGAAGCCGCACCAAGGTTCACATGCATGGGATGGCCGTGGGTAGGGCAGTGGATTTAGCCATCTTAGAAGGCTATGACCAACTAATAGATGAGCTTGAGAAGATGTTTGATGTTAGGGGTCAGCTGTGTGCTCGTGATAAGTGGGAGATTGTATATACCGACGATGAAGGGGATATGATGCTTGTTGGAGACGACCCATGGGAAGAATTTTGTAACATGGTGAGAAGAATTTTTATATGCTCTAGGGAGCAAGTGAAAAAGATGAGCTCAGGAAGCAAGCAGCTGACGTCAATAGAAGTCGAAGGGGCTGCCATAATCCCCGACTCCCCTGCAGTTTGA 2112 44.32 MACNGGDSYTQSCVSTQGSGRNDLYTELWRACAGPLVDVPRVDERVFYFPQGHMEQLEASTNLELNKRIPLCNLSSKILCRVIHIELLADHESDEVYAQITLMPESNQNEPNSLDPCPPEPARPVVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQATPTQDLVAKDLHGYEWRFKHIFRDNGELHVGVRRRARQQSSMPSSVISSQSMHLGVLATASHAVTTQTRFVVYYKPRTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERRFSGTIIGATDISPHWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPISKNKRPRQSTPAHGVTVSFCSLLSFIWSLFLIDICASHWISRSNLYSSVYFILDGADLPKPALWDSGLAESHDGKQSSNAAESRKGENNELCHHRETDAISNRTCVSRIQADGTWLSSTQSNSHKHPVNDMAQDYKTVPGCGWSFLSGPSTSHLVKLSDEQILDSTENGRKGETVASCRLFGIDLNHLAKLPTEKASYQPSSVSSDTDGRSSTLSVAQSDPKSDNLEVSVERKSEPLQASLKETQSNQSSSANTRSRTKVHMHGMAVGRAVDLAILEGYDQLIDELEKMFDVRGQLCARDKWEIVYTDDEGDMMLVGDDPWEEFCNMVRRIFICSREQVKKMSSGSKQLTSIEVEGAAIIPDSPAV 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9141928 9146989 - Carg21288-RA Car15g01164 163001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01164 703 Pfam AUX/IAA family 638 670 IPR033389 -
Car15g01164 703 Pfam AUX/IAA family 579 628 IPR033389 -
Car15g01164 703 MobiDBLite consensus disorder prediction 576 595 - -
Car15g01164 703 ProSiteProfiles PB1 domain profile. 592 673 IPR000270 GO:0005515
Car15g01164 703 Pfam Auxin response factor 223 301 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Car15g01164 703 MobiDBLite consensus disorder prediction 405 427 - -
Car15g01164 703 MobiDBLite consensus disorder prediction 408 422 - -
Car15g01164 703 MobiDBLite consensus disorder prediction 532 561 - -
Car15g01164 703 MobiDBLite consensus disorder prediction 532 598 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00671 Car15g01164 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00100 Car-Chr8:581618 Car15g01164 Car-Chr15:9141928 0 dispersed
Car10g00012 Car-Chr10:62700 Car15g01164 Car-Chr15:9141928 5.23E-32 dispersed
Car15g01164 Car-Chr15:9141928 Car16g00472 Car-Chr16:3011343 0 dispersed
Car15g01164 Car-Chr15:9141928 Car02g00671 Car-Chr2:5010194 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01164 K14486 - csv:101209208 1144.03