Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car15g01179 ATGAGTTGCGGTTCGGATTTGATGTCTGGGAACTCCGAGGCTGATGATCGTGAGATTGTAGAGAAGGATCCAACAGGACGATACATTCGGTACGATGAGATTTTGGGTAAAGGGGCATTCAAGACAGTATACAGAGCATTCGACGAAGTCGGTGGAATCGAAGTTGCTTGGAGCCAAGTTGACATTGAAGATGTTTTGCAGTCACCAGAACAGCTTCAGAGATTATATTCTGAGGTTCATCTGCTGAAGTCGTTGAAACATGAAAATATAATCAAATTCTATTGCTATTGGGTTGATGATAAGAACAAGACTATCAACATGATTACAGAATTGTTCACTTCTGGGAGTTTGAGGCAATATCGAAAGAAGCATAGGAAAGTTGATTTGAAAGCCTTCAAGAATTGGGCGAGGCAGATACTGCGAGGTTTGACGTATTTACATACTCACAACCCTCCAATTATTCATAGGGATTTGAAATGTGATAATATATTTGTCAATGGAAATACGGGAGATGTTAAAATTGGAGATCTCGGTTTGGCGATTGTCATGCAGCAGCCTACTGCTCGAAGTGTAATTGGCACTCCAGAGTTCATGGCTCCAGAACTTTATGATGAGGAGTATAATGAGCTTGTTGATATCTATTCTTTTGGCATGTGCATGTTGGAAATTGTGACTTGTGAATACCCGTATACATCCATGAGACTACCTGCAAGTGAACTCTTGAAAGATCCCTTCCTTGCAACTGAAAGTCCCAAGGAGCATAGTTTTGAACCTTTAAGGTTATCGAATGAGCCGTTCAAATCTGAAAATCCTCCTGTGCTAGCTTCTCATTCAATGGACACAGACCATAACTGCAGCAAATTCTCAGGCTCAGTGGTCTCATCTGTCAAAAGCGATAACGACATTTCTCAGTTTTCAACTCTCGAACTTCAGAGGCTCACCGAGACTAATGAATTGACGCTAAAAGGGGACATGACTGATCATAATACAATTTCGTTCCATTTGCGCATTGCTGAACTATGCGGTAAATCGAAGAATATCCATTTTGCCTTCTATCTCGACTCTGATACTTCATTGGCTATTGCTTTGGAGATGGTTGAACAACTCGAACTGTCGAATGAAGACGCGACTGTCATAGCGAAATTAATCAATGAATTAATTGCCAAGTTTGTTCCCGACTCGAAACCATGTCCAAACTATTATCACGGACAAAACACTACACACAGTTCTTCTGAAAGTGAAACTCAAGAGGACAAGACCTTCATTCCTCCTTTCTTCTCTGAGATGGTACTATCATCTCCCATGGTGGCTGGTGCAGGGAACAACCCGACGCATTTCACCAAGGTGGAAGATCAAGAAAACCTACAGTCGATCATTTCGTGTGCATCGCTCGACTTCAATCACTCAACTATCTCAGATTACAGCACAGGAAAAGGAACAATGGATTTCGATGCTGTTGGATCTATTTCGACGATGATTGATTTCGCAAACCCATCTCTAATCTCCTCCTGCTCAGGAATGTCGAAAGAAATGAGTTCGTCGAACTTTTCGAGCCTTTCTCTGGAAGAAAGAGATCACCAAGATGAACTGAAGATGGAGATTGATGCCATTGACTTACAGTACCATCAGTGCCTTTGTGAACTGTCAAGAATGAGAGAGGAAGCAATAGAAAGTGCGAAGAAGAGGTGGATGTCAAAGAAGAAAGCTCCTGCTTTTTGA 1719 41.77 MSCGSDLMSGNSEADDREIVEKDPTGRYIRYDEILGKGAFKTVYRAFDEVGGIEVAWSQVDIEDVLQSPEQLQRLYSEVHLLKSLKHENIIKFYCYWVDDKNKTINMITELFTSGSLRQYRKKHRKVDLKAFKNWARQILRGLTYLHTHNPPIIHRDLKCDNIFVNGNTGDVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEIVTCEYPYTSMRLPASELLKDPFLATESPKEHSFEPLRLSNEPFKSENPPVLASHSMDTDHNCSKFSGSVVSSVKSDNDISQFSTLELQRLTETNELTLKGDMTDHNTISFHLRIAELCGKSKNIHFAFYLDSDTSLAIALEMVEQLELSNEDATVIAKLINELIAKFVPDSKPCPNYYHGQNTTHSSSESETQEDKTFIPPFFSEMVLSSPMVAGAGNNPTHFTKVEDQENLQSIISCASLDFNHSTISDYSTGKGTMDFDAVGSISTMIDFANPSLISSCSGMSKEMSSSNFSSLSLEERDHQDELKMEIDAIDLQYHQCLCELSRMREEAIESAKKRWMSKKKAPAF 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
15 9208157 9212816 + Carg21303-RA Car15g01179 163016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car15g01179 572 ProSiteProfiles Protein kinase domain profile. 29 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g01179 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Car15g01179 572 Pfam Protein kinase domain 32 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car15g01179 572 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 344 388 IPR024678 GO:0004674|GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car02g00684 Car15g01179 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car14g01923 Car-Chr14:14738010 Car15g01179 Car-Chr15:9208157 1.54E-177 dispersed
Car15g01179 Car-Chr15:9208157 Car08g01027 Car-Chr8:7007254 2.60E-128 dispersed
Car15g01179 Car-Chr15:9208157 Car02g00684 Car-Chr2:5090692 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89409 PF00069 Pkinase 7.60E-46 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car15g01179 K08867 - csv:101207748 905.59